Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g00565 ATGGAAATAAACAAAATACAAGCTCTTTATGATACTTGCCATGTTTTGTTTTCTCAAGGAAGAGTTCCGAATTTTCAACAAATCCAGTACCTTAAAAATCTGTTAGACAAAATTGAAGCAATAGATGTAGGAATCGACGAGTTTGGATTTTGTGATTCTCCTACATCAGATGCAAACGTTGATAATGGTAGGAGGAGATTGCTTTGTGGGCAAAGTTTCTCTGAAATAACATACATTCATATTCATGAATGTGACGATGTGTCGATAGGTGTGTTCTGTGTTCCAGCAGGAAAAGAATTTCCTCTTCATGATCATCCAGGAATGACAGTGTTGAGCAAGCTTTTATATGGTTCCGTTTATGTCAAAGCTTATGATTGGATCAATTTTGATGGTACCAAAGGTCAAACAATAGGATTGGCGGGGAGAGTAATAGATGAAGTGATGAAAGCACCACATGAGCCATCGATATTATTTCCAAGAAGTGGTGGAAATATTCATTCTTTTAGAGCATTGACTTCATGCGCAATACTAGATGTGCTGTCTCCACCATACTCTCAAGACTTTGGAAGACCCTCCACTTACTACTATGACATTCCTATTCCTTATCTTAATGGTTATTCAATGCTTGAGGAGAAACCTTTGCCTGATGATTTGGTTGTTCGTGGAGCACCATACCTTGGACCTTCAATTGTAACTAATTACGATGATTACGATTTCAGTGATCAATTCGGTTATGAAAATCATGTATAA 750 0.372 MEINKIQALYDTCHVLFSQGRVPNFQQIQYLKNLLDKIEAIDVGIDEFGFCDSPTSDANVDNGRRRLLCGQSFSEITYIHIHECDDVSIGVFCVPAGKEFPLHDHPGMTVLSKLLYGSVYVKAYDWINFDGTKGQTIGLAGRVIDEVMKAPHEPSILFPRSGGNIHSFRALTSCAILDVLSPPYSQDFGRPSTYYYDIPIPYLNGYSMLEEKPLPDDLVVRGAPYLGPSIVTNYDDYDFSDQFGYENHV 249
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g00565 249 Gene3D Jelly Rolls 3 198 IPR014710 -
Vifa1g00565 249 CDD cupin_ADO 85 185 - -
Vifa1g00565 249 SUPERFAMILY RmlC-like cupins 3 197 IPR011051 -
Vifa1g00565 249 Pfam PCO_ADO 34 230 IPR012864 GO:0016702
Vifa1g00565 249 PANTHER UNCHARACTERIZED 6 230 IPR012864 GO:0016702
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g00565 Vifa-Chr1 97198180 97199365 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g00565 K23953 - gmx:100811165 380.948
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa1g00565 1 97198180 97199365 Vifa1g00565 1 97198180 97199365 ECH