Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g00457 ATGAAAGCAGAAACGGTTACACTTGTGCTGGTGAATCTAGCTGGAATAATGGAAAAGGCCGACGAGTCCTTACTCCCCGGCGTTTACAAAGAAGTCGGTGCGGATCTTCATACTGACCCAACCGGACTCGGTTCACTCACTCTCTTCCGATCCATTGTTCAATCTGGTTGTTATCCAATTGCCGCGTACCTCGCCACGCGCCATAATCGGGCTCATGTTATTGCTCTCGGGGCTTTTCTTTGGGCTGCCGCTACTTTCCTTGTTGCCTTTTCCTCTACTTTCTTTCAGGTAGCGTTGTCGCGGGGATTAAATGGGATTGGTCTCGCACTTGTAACTCCTGCAATTCAGTCCCTTGTTGCAGACTCTACTGATGATAACAATCGCGGTATGGCTTTTGGATGGCTTCAACTAACTGGTAACATTGGTTCGATTGTTGGTGGCCTCTTCTCACTTTTGATAGCTCCAATAACAATCTTTGGAATCCCTGGTTGGAGAGTTTCATTTCATGTTGTTGGAATAATAAGTATTATTGTTGGTACTTTAGTATACATCTTTGCCAAAGATCCACATTTCGAAGATAAAGGCACACTTAAAAATAATAGCAATCCAGTTCAAAAGGAAACATTTTGGTCCGGTGTAAGAGCCTTGATTCAGGAAGCCAAATCGGTTTCTAGGATTTCGTCTTTCCAGATCATTGTAGCACAAGGTGTCACTGGTTCCTTTCCTTGGTCGGCTTTATCGTTTGCGCCAATGTGGTTAGAATTGACTGGCTTCTCCCATGGGAAAACTGCTTTCCTTATAGCTTTGTTTGTGGTTGCGAGTTCTCTTGGAGGTTTGTTTGGAGGAAAGATGGGGGATATCCTTTCCAGGCATCTTCCAAATTCGGGGAGGATAATTCTAGCGCAGATAAGCTCTGGTTCTGCAATTCCACTAGCGGCGATTCTTTTGTTGGGTTTACCAGATGATCCATCTACAACATTGTCACATGGTTTGCTGTTAATTATTATGGGATTCTCTATATCTTGGAATGGTCCTGCTACAAATAATCCAATTTTTGCAGAGATAGTTCCCGAGAGATCCCGAACAAGTGTATACGCATTGGACCGTTCTTTCGAGTCTATACTATCATCTTTTGCTCCCCCCGCAGTGGGGATTTTGGCACAACACGTTTACGGGTATCAGCCTATTCCTGAAGGCTCTAGCGAATCTCAAGAGATTTTAACAGACAGAGGGAATGCTGCATCATTGGCGAAATCTCTTTACACGGCAATAGGAATTCCGATGGCTCTGTGCTGTTTAATCTACTCATTTCTTTATAAGACCTATCCGAGAGATCGGGAACGGGCTAGGATGGACGTTTTAATAGAATCGGAGATGAAGCATATTGAGTCGGATGGCTTAGTCGTGGATAAGTTCGAGGAAATATATATTGGAGATTATGATGGTGATGGTGTTGATCTTGATGATGAAGTGCGTGTATTTCTCTAG 1488 0.4382 MKAETVTLVLVNLAGIMEKADESLLPGVYKEVGADLHTDPTGLGSLTLFRSIVQSGCYPIAAYLATRHNRAHVIALGAFLWAAATFLVAFSSTFFQVALSRGLNGIGLALVTPAIQSLVADSTDDNNRGMAFGWLQLTGNIGSIVGGLFSLLIAPITIFGIPGWRVSFHVVGIISIIVGTLVYIFAKDPHFEDKGTLKNNSNPVQKETFWSGVRALIQEAKSVSRISSFQIIVAQGVTGSFPWSALSFAPMWLELTGFSHGKTAFLIALFVVASSLGGLFGGKMGDILSRHLPNSGRIILAQISSGSAIPLAAILLLGLPDDPSTTLSHGLLLIIMGFSISWNGPATNNPIFAEIVPERSRTSVYALDRSFESILSSFAPPAVGILAQHVYGYQPIPEGSSESQEILTDRGNAASLAKSLYTAIGIPMALCCLIYSFLYKTYPRDRERARMDVLIESEMKHIESDGLVVDKFEEIYIGDYDGDGVDLDDEVRVFL 495
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g00457 495 Gene3D MFS general substrate transporter like domains 224 448 IPR036259 -
Vifa1g00457 495 Pfam Major Facilitator Superfamily 20 380 IPR011701 GO:0022857|GO:0055085
Vifa1g00457 495 PANTHER SPINSTER 5 460 IPR044770 -
Vifa1g00457 495 FunFam Major facilitator superfamily protein 1 398 - -
Vifa1g00457 495 CDD MFS_spinster_like 8 435 IPR044770 -
Vifa1g00457 495 ProSiteProfiles Major facilitator superfamily (MFS) profile. 7 443 IPR020846 GO:0022857
Vifa1g00457 495 Gene3D MFS general substrate transporter like domains 2 194 IPR036259 -
Vifa1g00457 495 SUPERFAMILY MFS general substrate transporter 7 447 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g00457 Vifa-Chr1 74483653 74486625 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g00457 - - gmx:100783378 791.956
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa1g00457 1 74483653 74486625 Vifa1g00457 1 74483653 74486625 ECH