Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g00355 ATGGCGAGAAAAACCAACAATTGCACCATATGCGAGAATTCAAATCAACCTTCTATATGTTCTATTTGTGTCAACTACAAGTTAAATGAGTATTACACTACGTTGAAATCATTGAAAGAGCGTCGAGATTTCTTGTATTCTAAATTGAGCCAAGTTCTTGTCCGTAAGGGAAAGGGAGATGATCAAACAAATTGGAGAGTGCTTCGACACGAAAAGCTTGCAAGGTTGAGGGAGAAGCTCCACCATAGTCAACAACAAGTTACTCAAGGACGAGCTAAGAATGAGGCTATGTCTGCTGATCTGAAACTTAAATATGGAGTACTTGATTCTGCCCTTTCTATGTTGGAAAAGAATCGAGTGGAGCAATTGGAGAAGTTTTACCCTAATCTAATATGCACCCAAAGCTTAGGGCATGGGGCGATCACCGCTGAGCGTCTTCATAAACAGTCTGTGGTCATAAAACAGATATGCAAGTTGTTTCCACTACGCCAGGTAGTAGTCAATATACAGGGAAAGGATGAATTATATGATCAAATTTGCAATGCACTCTTGCCAAGAGCAGTTGATCCCAAGTCTGTTCCACCAGAAGATCTTTCCGTATCTTTAGGATACATGGTGCAACTTCTAAATCTTGTTGTTCACAACTTGGCTGCCCCAGCACTTCATAACACAGGTTTTGCGGGTTCTTGCTCTCGAATATGGCAACGTGATTCTTATTGGGATGCACGGCCTTCCTCGAGGAGCAATGAATATCCTCTTTTTATACATCGGCAATATTATTGCTCGCCTAATGGGGGAGAAAACTCATGGTCTGATAAAAGTTCAAGCAATTTCGGTGTTGCTTCAATGGAATCTGACAGGAGGCCTCGTTTGGACTCATCTGGGAATGTCCCTTCTGAGGCATCTACGTTCGAAGCATTTGCAAAATTATTGGCAACTCTCTCATCATCCAAGGAAGTTCAATCTGTTTTCTCCTTGAAAATGGCTCGCTCTAGGACATGCAAACAAGTTCAACAATTGAACAAGTCTGTATGGAATATGAACTCTGCTATTTCGTCATCTACTTTGCAGGAAAGTGCACATTATGTGCCCACATCGAGAATTGAGAATTATATGCCGAGTTCTGCTGCTAGTTTTCTTTATCCTACTGATTCATCTGATCGAAAACGTGAGTGCCTGATTGAAGGGTGGGATATTGTTGAACATCCTACTCTTCCTCCTCCGCCATCACAAACTGAGGATGTTGAGCACTGGACTCGAGCCATGTTCATAGATGCTAAAAGGAGATGA 1290 0.4194 MARKTNNCTICENSNQPSICSICVNYKLNEYYTTLKSLKERRDFLYSKLSQVLVRKGKGDDQTNWRVLRHEKLARLREKLHHSQQQVTQGRAKNEAMSADLKLKYGVLDSALSMLEKNRVEQLEKFYPNLICTQSLGHGAITAERLHKQSVVIKQICKLFPLRQVVVNIQGKDELYDQICNALLPRAVDPKSVPPEDLSVSLGYMVQLLNLVVHNLAAPALHNTGFAGSCSRIWQRDSYWDARPSSRSNEYPLFIHRQYYCSPNGGENSWSDKSSSNFGVASMESDRRPRLDSSGNVPSEASTFEAFAKLLATLSSSKEVQSVFSLKMARSRTCKQVQQLNKSVWNMNSAISSSTLQESAHYVPTSRIENYMPSSAASFLYPTDSSDRKRECLIEGWDIVEHPTLPPPPSQTEDVEHWTRAMFIDAKRR 429
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g00355 429 MobiDBLite consensus disorder prediction 267 296 - -
Vifa1g00355 429 MobiDBLite consensus disorder prediction 267 282 - -
Vifa1g00355 429 PANTHER UV RADIATION RESISTANCE-ASSOCIATED GENE PROTEIN 6 350 - -
Vifa1g00355 429 Pfam Vacuolar sorting 38 and autophagy-related subunit 14 8 319 IPR018791 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g00355 - - gmx:100813297 692.189
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa1g00355 1 56642630 56647519 Vifa1g00355 1 56642630 56647519 ECH