Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g00286 ATGAGCGACGCGCTTCTTTGCAATGAATCCGACGAAGTTGATAGCTCCGCGAAGAACAGCATTCCGGAGCCGGAGAAGGAAAATAGACAGTCTCCACCGGCGGTGATTGCTGGAAGAAGCCGTTCTCAAGGAGGTGGACGGAGAGTGACGCCGACTAGCTTCACGGTGGTTTCTGACGGTAGATCTGTTGTGGAGAGAGTTCTTCCTAACGGAGATTTCTATGTAGGAAGTTTCTCCGGGAACGTACCTAATGGATCCGGTAAGTATCTCTGGACCGACGGTTGTATGTATGAAGGTGAATGGAAGCGAGGAAAAGCTTCGGGGAAAGGAAAATTTTCATGGCCTTCGGGTGCGACTTACGAGGGAGAGTTCAAGTCGGGTCGAATGGAAGGGTTTGGGACTTTCGTTGGATCCGACGGAGATACTTACCGCGGGTCATGGAGTTCCGATAGGAAGCACGGGTTCGGTCAGAAACGTTACGCGAACGGTGATTTGTATGAAGGTTGGTGGAAGCGTAACGTGCAAGACGGTCAGGGGCGTTACGCTTGGAAGAACGGAAATGAATACGTTGGAGAATGGCGTAACGGCGTTATTTCTGGTAAAGGTCAGTTGGTTTGGGTTAACGGAAACCGTTACGAGGGTCAGTGGGAGAATGGTGTACCGAAAGGACAAGGAGTTATGAAGATTCAGCATGGTTTGAATTTCAAGGGTTCAAGCTGTGTTGGTGGTGGATTGTTATGGAATGACAGTTTTGCCCCTATGATGATGATGAAGAGGTCTTCGGTTGATACTGTTAGTGCTAGAGGGAGTTTGAATGATAAGAGTTTTCCTAGGATTTGTATTTGGGAATCTGAGGGTGAAGCTGGTGATATCACTTGTGATATTGTTGATAATCTGGAAGCATCCATGTTTTATCGCGATGGGACGGCGTCTGAGCCTGATGAATTTCGGAAGCACCCTTGTTGTTTCTCTTCTGAAGTTAAGAGACCTGGTGAAATTATTTCTAAAGGGCATAAGAATTATGAGTTGATGCTCGATTTGCAATTGGGGATTAGGTATACTGTTGGGAAGGAAGCGTCTAAATTGCGAGAGCTTAAACCTAGTGATTTTGAATCTAAGGAGAAGTTCTGGACAAAGTTTCCACCCGAAGGATCCAAAATTACCCCGCCCCATCAAACTGCAGAGTTTCGATGGAAAGATTACTGCCCTGTTGTTTTTAGACATTTGAGGAAGCTGTTTCAGGTTGATCCTGCTGATTACATGTTGGCTATATGTGGGGATGATGCTCTCAGAGAACTTTCCTCTCCTGGGAAAAGCGGAAGTGTCTTCTACTTGACCCAAGATGACCGATTCATGATTAAGACAGTGAAGAAATCTGAAGTCAAGGTCCTTCTTCGGATGCTTCGAAGCTATTACAAACACGTGTGTAATTATGAGAATTCACTCGTGACAAAATTCTACGGGGTACATTGTGTAAAACCAATCGGAGGCCAGAAGATCCGGTTTATTGTAATGGGAAATCTTTTCTGCTCTGAGTATCCAATTCATAGAAGATTTGATTTGAAAGGATCTTCACATGGTCGTGCAACAGACAAACCTGAGGATGAGATTGATGAAACTACCACCCTCAAGGACCTTGATCTAAATTATGTGTTTCGGGTTCAAAGAAATTGGTACCAGGATCTTATTAAACAAATTGAGCATGATTGCGAATTTTTGGAAACCGAGAAAATTATGGATTACAGTCTTTTGGTTGGCCTTCATTTTCGCGATGACAATACGTATGACAAAATGGGGTTGTCACCTTTTCTTTTGCGCACTGGCAATCAGGACTCGTATCATAATGAGAAGTTTATGCGTGGTTATCGCTTTCTTGAAGCAGAGCTGCAAGATAGGGATCGGGTTAAATCTGGAAGGAAATCATTAATTAGGCTAGGAGCCAATATGCCAGCAAGAGCCGAGAGACTAGCAAGAAGGAGTGATTTTGACCAATACACCAATGGCGGAATCAGCCATTTGAACCCTTATAGCAGTGGGGAGACTTATGATTGCGTTTTATATTTTGGAGTTATCGATATTTTGCAAGACTACGATATTAGCAAGAAGCTTGAACATGCTTACAAGTCCTTGCAAGTTGACCCAACTTCAATTTCCGCGGTTGATCCAAAGCTATACTCAAAGAGGTTTCGAGATTTTATCGGGAGAATATTCATTGAAGATTGGTAG 2226 0.4403 MSDALLCNESDEVDSSAKNSIPEPEKENRQSPPAVIAGRSRSQGGGRRVTPTSFTVVSDGRSVVERVLPNGDFYVGSFSGNVPNGSGKYLWTDGCMYEGEWKRGKASGKGKFSWPSGATYEGEFKSGRMEGFGTFVGSDGDTYRGSWSSDRKHGFGQKRYANGDLYEGWWKRNVQDGQGRYAWKNGNEYVGEWRNGVISGKGQLVWVNGNRYEGQWENGVPKGQGVMKIQHGLNFKGSSCVGGGLLWNDSFAPMMMMKRSSVDTVSARGSLNDKSFPRICIWESEGEAGDITCDIVDNLEASMFYRDGTASEPDEFRKHPCCFSSEVKRPGEIISKGHKNYELMLDLQLGIRYTVGKEASKLRELKPSDFESKEKFWTKFPPEGSKITPPHQTAEFRWKDYCPVVFRHLRKLFQVDPADYMLAICGDDALRELSSPGKSGSVFYLTQDDRFMIKTVKKSEVKVLLRMLRSYYKHVCNYENSLVTKFYGVHCVKPIGGQKIRFIVMGNLFCSEYPIHRRFDLKGSSHGRATDKPEDEIDETTTLKDLDLNYVFRVQRNWYQDLIKQIEHDCEFLETEKIMDYSLLVGLHFRDDNTYDKMGLSPFLLRTGNQDSYHNEKFMRGYRFLEAELQDRDRVKSGRKSLIRLGANMPARAERLARRSDFDQYTNGGISHLNPYSSGETYDCVLYFGVIDILQDYDISKKLEHAYKSLQVDPTSISAVDPKLYSKRFRDFIGRIFIEDW 741
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g00286 741 PIRSF PIP5K_plant 15 241 IPR017163 GO:0005524|GO:0016308
Vifa1g00286 741 PIRSF PIP5K_plant 245 741 IPR017163 GO:0005524|GO:0016308
Vifa1g00286 741 Pfam MORN repeat 143 164 IPR003409 -
Vifa1g00286 741 Pfam MORN repeat 97 118 IPR003409 -
Vifa1g00286 741 Pfam MORN repeat 189 211 IPR003409 -
Vifa1g00286 741 Pfam MORN repeat 74 96 IPR003409 -
Vifa1g00286 741 Pfam MORN repeat 166 187 IPR003409 -
Vifa1g00286 741 Pfam MORN repeat 120 142 IPR003409 -
Vifa1g00286 741 Pfam MORN repeat 212 227 IPR003409 -
Vifa1g00286 741 SUPERFAMILY Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain 160 242 - -
Vifa1g00286 741 FunFam Phosphatidylinositol 4-phosphate 5-kinase 104 148 - -
Vifa1g00286 741 SMART PIPK_2 366 738 IPR002498 GO:0016307|GO:0046488
Vifa1g00286 741 Gene3D - 508 737 - -
Vifa1g00286 741 ProSiteProfiles Phosphatidylinositol phosphate kinase (PIPK) domain profile. 335 737 IPR002498 GO:0016307|GO:0046488
Vifa1g00286 741 Gene3D - 104 148 - -
Vifa1g00286 741 Gene3D - 149 195 - -
Vifa1g00286 741 Gene3D - 196 238 - -
Vifa1g00286 741 Gene3D - 62 103 - -
Vifa1g00286 741 FunFam Phosphatidylinositol 4-phosphate 5-kinase 326 507 - -
Vifa1g00286 741 Pfam Phosphatidylinositol-4-phosphate 5-Kinase 425 735 IPR002498 GO:0016307|GO:0046488
Vifa1g00286 741 SUPERFAMILY Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain 69 173 - -
Vifa1g00286 741 MobiDBLite consensus disorder prediction 1 53 - -
Vifa1g00286 741 SUPERFAMILY SAICAR synthase-like 336 737 - -
Vifa1g00286 741 Gene3D Phosphatidylinositol Phosphate Kinase II Beta 326 507 IPR027484 -
Vifa1g00286 741 SMART morn 141 162 IPR003409 -
Vifa1g00286 741 SMART morn 95 116 IPR003409 -
Vifa1g00286 741 SMART morn 210 231 IPR003409 -
Vifa1g00286 741 SMART morn 187 208 IPR003409 -
Vifa1g00286 741 SMART morn 164 185 IPR003409 -
Vifa1g00286 741 SMART morn 72 93 IPR003409 -
Vifa1g00286 741 SMART morn 118 139 IPR003409 -
Vifa1g00286 741 CDD PIPKc_AtPIP5K_like 340 736 - -
Vifa1g00286 741 PANTHER PHOSPHATIDYLINOSITOL-4-PHOSPHATE 5-KINASE 83 737 IPR023610 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g00286 Vifa-Chr1 44444457 44448807 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa1g00286 30 740 Acyl Lipid Metabolism Gene Families AT1G21980 73.626 0.0 1083
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g00286 K00889 - gmx:100790632 1233.78
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa1g00286 1 44444457 44448807 Vifa1g00286 1 44444457 44448807 ECH