Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g00247 ATGAAATCGAAGACACATACCGGAAACGGTTACGCGGCCGAGAATGGCGGATGTGGAGGCGGAGGCGGAGGTGGAGGTGGAAGCAGCAGCTCACCTAGTCCGCCGCTCTCTCCTCCTCGTCACTCCGGTGTTTTGCATTTACGGAAGAAATTACGGCGGACGAAGTCACTGTCGGCGCGGATGAGTCTCCGATACTTCTTCCTCCTGCCGCTGGTTTACATCTCCGGTCTTCTGATGTGCGTCGGACCGTTTCCTTTTACGTTCTCCTCTCTCATTGGTCACGCTCCTCTTCCCGGTTCTCGTTACCGGAGTCACGAAGTTTTTCACAAGCTTTGGCATGAAATCGATTCTGATAATTCATCTTTCATCGAGTTGTCTTCTGTGTGGAAATACAAAAGGAAGTTGAGAGAAAAGAAGCCTTGTCCGAATTTGACTGCTTTGCATCATGAACATTTTGTGTCCCCTGGCCTAAATGGTTTTTTGATTGTCGAGGCCAATGGCGGTCTTAATCAGCAACGCTCTGCAATTTGCAATGCTGTGGCTGTTGCTGGACTACTAAATGCAATTCTAGTTATACCACATTTTGAATTTCACAATGTGTGGAAAGATCCAAGTGAATTTGGGGATATATATGACGAGGATCATTTTATATCCACACTTGATGGTTATGTGAAGGTAGTTAAAGAGCTTCCTGAGGCAATAATGGAGAGACATAATTACAATATGAGTAATATAACTACCATCAAAGTTGAAGCTTGGGCTCCTGTCAGTTATTACACGGGAGCTGTTTATCCTATCTTGCAAAAGGAAGGGGTTCTTCGAATAGCTCCATTTGCTAATCGTTTGGCAATGAGTGTCCCTCCACATGTTCAATTTCTAAGATGTCTTACTAATTATAAAGGATTGAGGTTTTCTTCTTCAATATCAGCACTAGCTGATAATCTGGTTTACCGAATGATTGAGAAGAGCTCAAGGACAGATGGAAAATATATTGCTGTGCATCTTCGCTTTGAGGAGGACATGGTAGCATTCTCCTGTTGTGTATATGATGGAGGAAACACAGAAAAGTTGGAAATGGATTCAGCTCGTGAAAAGGGGTGGAGAGGAAAGTTCAAAAGAAAAGATCGTATCATTGCACCTGACCTATATCGAGTCAATGGAAGATGTCCACTTACCCCCCTAGAGGTTGGGATGATGCTACGTGGCATGGGATTCAATAACAATACCTCAATATATTTAGCTTCTGGGAAAATATATCATGCTGAAAAATATTTGGCTCCTTTAATAAAGATGTTTCCAAATCTGTATACTAAGGAGTCTCTTGCAACACCAGACGAGCTTGCTCCTTTTATGGGCTATTCCTCCCAATTGGCAGCACTGGATTACACAGTATGCTTGTTTAGTGAGGTTTTTGTTACAACTCAAGGTGGTAACTTTCCTCATTTTCTAATGGGCCATAGAAGATTCCTCTATGATGGGCATGCCAAGACCATTATTCCTGATAAACGCAAACTTGTTGTCCTTTTTGAAAACACAAGTATCAGTTGGAATGCTCTCAAGGAGCAGATGGATGACATGCTCACTGAAAGTGATCGCAAAGGAATCATGGTCCCTAGAGTTAGAAAAATCAACAGAAAAACTTCTGTCTACACTTACCCTTTACCAGAATGTAGATGCCTACAGCAGTCTCTTGTCAATGCAACAATTGACCACGATGTAGACATTCTTGATAATTACAGCCGAACAAAAGCTTGA 1755 0.4262 MKSKTHTGNGYAAENGGCGGGGGGGGGSSSSPSPPLSPPRHSGVLHLRKKLRRTKSLSARMSLRYFFLLPLVYISGLLMCVGPFPFTFSSLIGHAPLPGSRYRSHEVFHKLWHEIDSDNSSFIELSSVWKYKRKLREKKPCPNLTALHHEHFVSPGLNGFLIVEANGGLNQQRSAICNAVAVAGLLNAILVIPHFEFHNVWKDPSEFGDIYDEDHFISTLDGYVKVVKELPEAIMERHNYNMSNITTIKVEAWAPVSYYTGAVYPILQKEGVLRIAPFANRLAMSVPPHVQFLRCLTNYKGLRFSSSISALADNLVYRMIEKSSRTDGKYIAVHLRFEEDMVAFSCCVYDGGNTEKLEMDSAREKGWRGKFKRKDRIIAPDLYRVNGRCPLTPLEVGMMLRGMGFNNNTSIYLASGKIYHAEKYLAPLIKMFPNLYTKESLATPDELAPFMGYSSQLAALDYTVCLFSEVFVTTQGGNFPHFLMGHRRFLYDGHAKTIIPDKRKLVVLFENTSISWNALKEQMDDMLTESDRKGIMVPRVRKINRKTSVYTYPLPECRCLQQSLVNATIDHDVDILDNYSRTKA 584
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g00247 584 CDD O-FucT_plant 160 497 IPR024709 -
Vifa1g00247 584 MobiDBLite consensus disorder prediction 1 44 - -
Vifa1g00247 584 Pfam GDP-fucose protein O-fucosyltransferase 160 489 IPR019378 -
Vifa1g00247 584 PANTHER O-FUCOSYLTRANSFERASE FAMILY PROTEIN 62 563 IPR024709 -
Vifa1g00247 584 PIRSF UCP009360 39 563 IPR024709 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g00247 Vifa-Chr1 39458673 39465789 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa1g00247 159 559 Miscellaneous Gene Families AT1G22460 38.313 1.45e-86 278
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g00247 - - gmx:100812590 968.378
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa1g00247 1 39458673 39465789 Vifa1g00247 1 39458673 39465789 ECH