Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g00203 ATGGCTTCACCGTTTGGATGGTACGGTCCTCTCATAGATCTCTGCAATGCCTCTCATCACATAGGCGAATTCGTTCAACTTCTCGTTTTCGTACACCGTTGCTTCCCCGTTCAGTACAAATCGTCCAAATCTGGAAAGGACCTAACGCGATTGGATATTCAAGTCGGCGATGATACGGCGCCGTATTTTGGAGTGTCTCTTTGGCAGAGTCAAATGGGGTCAATGGTTTCCGCTGGAGACGTCGTTTTGTTACAGAATTTCATGATTACTAAATTCGGGGGTGTGCTTGAAGCCAAAACTGTTCTGTGGTCTTCTCTCTTTTGCTTGCTTCATCCTTTCCACTCACTTTTTTCAAAGGATGTTGAAGAGATGATAGCAGGTTGTCGAATTGGGACAGCAGCAACGAAGGAGAAGTTAAGTAGGGTAATAAAGTGGGTGCGACAGTCTCGGACCACTATCTGCAACAACGAGTTGCAGTCTACTAAAAAAATAGAGTACCTGCCTAGAAACTGGACAGTTCTTGAAGAGAGAGAGCCTAAGGACTGCTGTTCACTTATGGAAGTCTCTCAGCTAGCAACATCGTGCAAGACTATCGTCCTTGCATCGATTTGTGAAATTGTTCCATTACGTAACACCAAAACTTCAGGTGATACTGTGAAAGAGAAGATTTTCCTTAGTATGAGAGTTTGCAAAGCCGAGGATAATAACTTGGTGGAAGATCTCTTATGCACTGGCTGCCAGCTATGTGGTTCACCCTTAGGTTCAGAATCTGAGCAAAATGCTTTTCCACTAGTTTGTTCGAAAAGTTCAAGCCACCTTCATGCAGTATGCTCGATATATAGGCCTTTCATGCTATATGTGTGGGATGAATCATACTTCATGCCAGTTCTCGTCAAGAACAAGGCTGCAGAAATCTTATTTGGAAACATAAAGGCTGAGAATGTCTATTCATGTTATAGAGAGCAAATGCTTAACCAGAATCCGGGTCCAAAATATATTTCCAAGGAGAAAGATGCAGATGAAAGACTTTCTAATAACCTGAGACTTTCTTGGGAGGGACTTCCCGGTGCCAGTTCATTAGAGGAGGAGGCTAAAAGCTTGCAATTCGAGGAAAAACATCGGACTAAACCATTTAACTTTTATCATATCTGGTTGATTTTTCTAAAATTATTGCTGAAACAAGGAAAGAACAGTCCTCTAAAATTTGAGATCCTTGTTGATCCTAACATAGATGTTGAAAATGGAAAACTTGAAATGGTTTCTGCAACATTGCCCTGTTTTGGCACCAAGTGA 1293 0.42 MASPFGWYGPLIDLCNASHHIGEFVQLLVFVHRCFPVQYKSSKSGKDLTRLDIQVGDDTAPYFGVSLWQSQMGSMVSAGDVVLLQNFMITKFGGVLEAKTVLWSSLFCLLHPFHSLFSKDVEEMIAGCRIGTAATKEKLSRVIKWVRQSRTTICNNELQSTKKIEYLPRNWTVLEEREPKDCCSLMEVSQLATSCKTIVLASICEIVPLRNTKTSGDTVKEKIFLSMRVCKAEDNNLVEDLLCTGCQLCGSPLGSESEQNAFPLVCSKSSSHLHAVCSIYRPFMLYVWDESYFMPVLVKNKAAEILFGNIKAENVYSCYREQMLNQNPGPKYISKEKDADERLSNNLRLSWEGLPGASSLEEEAKSLQFEEKHRTKPFNFYHIWLIFLKLLLKQGKNSPLKFEILVDPNIDVENGKLEMVSATLPCFGTK 430
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g00203 430 SUPERFAMILY Nucleic acid-binding proteins 19 107 IPR012340 -
Vifa1g00203 430 Gene3D - 18 109 IPR012340 -
Vifa1g00203 430 PANTHER OS04G0450500 PROTEIN 1 429 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g00203 - - gmx:100816843 606.29
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa1g00203 1 33177883 33181281 Vifa1g00203 1 33177883 33181281 ECH