Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g00158 ATGCAGGAAGCAGGACCTGGTGGACTAGGAGGAGGTGGAATATGGGGTGCAGCAACTGATGAGAACAGCATCTATACCAACATTGGAAATTCAGAAGGAAAAACTTTCCAACTTTTACCATCAAATGTGAATACAACAGCTGGAGCATGGGTGGCAATGGATGCTAGAAATGGAAAAATTCTTTGGTCCACTGCAAACCCTAGCAATGGTCGTCCTATTGGCCCTGTTAGTGTTGCAAATGATGTTCTTTTTGGTGGATCTACAGATATTTCGGGACATATATATGCAATGAATGCAAGAAATGGTAAAATTATATGGTCTTATGAAACTGGAGGTAGTGTTTATGGTGGCATGTCAATTAGCAATGGATGTATTTATGTTGGTAGTGGATATAATGTCTCTTTAGGAGTTGTTTTTAACTATACAGGTGGAACGACACTGTTTGCATTCTGTGTCTAA 459 0.3987 MQEAGPGGLGGGGIWGAATDENSIYTNIGNSEGKTFQLLPSNVNTTAGAWVAMDARNGKILWSTANPSNGRPIGPVSVANDVLFGGSTDISGHIYAMNARNGKIIWSYETGGSVYGGMSISNGCIYVGSGYNVSLGVVFNYTGGTTLFAFCV 152
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g00158 152 Gene3D - 7 150 IPR015943 GO:0005515
Vifa1g00158 152 SMART ire1_9 75 109 IPR018391 -
Vifa1g00158 152 SMART ire1_9 17 65 IPR018391 -
Vifa1g00158 152 PANTHER QUINOPROTEIN ALCOHOL DEHYDROGENASE (CYTOCHROME C) 3 152 - -
Vifa1g00158 152 Pfam PQQ-like domain 51 130 IPR002372 -
Vifa1g00158 152 SUPERFAMILY Quinoprotein alcohol dehydrogenase-like 45 137 IPR011047 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g00158 - - aip:107645018 219.164
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa1g00158 1 24446030 24446488 Vifa1g00158 1 24446030 24446488 ECH