Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g00145 ATGAAGTTAAGAGACGGTAGTGAAATCAGTCTTCTAGTATTGTTACTGTGCTTAACAACTGTCTCTCTTAAAACAGAAGCTCTGTGGATAAAACTTCCCAGTTCAGGAACAAAGTGTGTGTATGAAGATATTAAAACACACGTCGTCGTTTTAGGTGATTACTATTCTGTAGTTGAACAAGGTTATAAGGCTCATAGAATTTCCGCCCAGGTAACTTCTCCTTATGGAAACAACCTTCACCATACTGAAAATGTTACACATGACCATTTTGCATTTACAACGACCGAAAGTGGAAAGTATCTTGTGTGCTTTTGGTTGAGTGGAAATCAACAAGAAGGTGCAACTCCAAATGTCAACCTTGACTGGAAAACAGGAATTGCAGCCAAGGATTGGGACTCTGTTGCAAAGAAACAAAAGATTGACGGTCTTGAACTTGAACTCATGAAGGTTGAATTACTAGTGGGTGCCATTCACCAATATCTAACTAACTTGAAGGATAAGGAAGCAAAGGTGAGGGAAGTGAGTGAAAAAACAAATGCTAAAGTGGCATGGTTTAGTATCATGTCTCTTGGTCTCTGCATTTCTGTTTCAGCATTGCAACTTTGGTATCTACAGAGCTACTTTCGAAAGAAGAAACTCATATAG 645 0.3876 MKLRDGSEISLLVLLLCLTTVSLKTEALWIKLPSSGTKCVYEDIKTHVVVLGDYYSVVEQGYKAHRISAQVTSPYGNNLHHTENVTHDHFAFTTTESGKYLVCFWLSGNQQEGATPNVNLDWKTGIAAKDWDSVAKKQKIDGLELELMKVELLVGAIHQYLTNLKDKEAKVREVSEKTNAKVAWFSIMSLGLCISVSALQLWYLQSYFRKKKLI 214
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g00145 214 ProSiteProfiles GOLD domain profile. 37 149 IPR009038 -
Vifa1g00145 214 PANTHER TRANSMEMBRANE EMP24 DOMAIN-CONTAINING PROTEIN 10 211 IPR015720 -
Vifa1g00145 214 Coils Coil 157 177 - -
Vifa1g00145 214 Pfam emp24/gp25L/p24 family/GOLD 27 209 IPR009038 -
Vifa1g00145 214 SMART EMP24_GP25L_2 27 209 IPR009038 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g00145 Vifa-Chr1 23547496 23548601 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g00145 K20352 - qsu:112032548 270.011
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa1g00145 1 23547496 23548601 Vifa1g00145 1 23547496 23548601 ECH