Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g00065 ATGCGTATGAAATCATCAAATCCTCTTGTTGTAGGTAATGTAATTGGAGATGTTTTAGATCCATTTACAAATTCAATATCTCTAAAGGTTGTTTATGAAAATAATAAAGAAGTGATCAACAGTGGTGAGCTCAAACCATCTCAAATAATCAATCCACCAAGAGTTCAAATAGGTGGAAATGATCTCAGGACTCTTTACACTCTGGTGATGGTGAACCCTGATGCACCAAGCCCTTGTGATCCTCATATGAGAGAATACCTGAATTGGATGGTAATCAATATTCCAGCTACAACAGGGACAACGTTTGGACAAGAGATAGTGAGCTATGAAAGTCCAAGACCAACATCAGGGATTCATCGTATGATATTTGTGCTGTTTCAACAACCTTGTAGACACACTATTCTACCACCTGGATGGAGACAGAATTTCATTACTAGAGATTTTGCAGAAATTTATAATCTTGGATTACCTGTTGCTGCTCTCTATTTCAACTGTCAAAGAGAAAATGGATGTGGTGGAAGGAGGATGATCAAATATTAG 540 0.3741 MRMKSSNPLVVGNVIGDVLDPFTNSISLKVVYENNKEVINSGELKPSQIINPPRVQIGGNDLRTLYTLVMVNPDAPSPCDPHMREYLNWMVINIPATTGTTFGQEIVSYESPRPTSGIHRMIFVLFQQPCRHTILPPGWRQNFITRDFAEIYNLGLPVAALYFNCQRENGCGGRRMIKY 179
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g00065 179 FunFam Terminal flower 1 2 175 - -
Vifa1g00065 179 Gene3D - 2 171 IPR036610 -
Vifa1g00065 179 PANTHER PHOSPHATIDYLETHANOLAMINE-BINDING PROTEIN 12 170 IPR035810 -
Vifa1g00065 179 CDD PEBP_euk 28 165 IPR035810 -
Vifa1g00065 179 Pfam Phosphatidylethanolamine-binding protein 53 160 IPR008914 -
Vifa1g00065 179 SUPERFAMILY PEBP-like 7 172 IPR036610 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g00065 Vifa-Chr1 12159597 12161908 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g00065 K16223 - psat:127130441 349.362
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa1g00065 1 12159597 12161908 Vifa1g00065 1 12159597 12161908 ECH