Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian9g01548 ATGGAGCCTTCACTCGTACTATCTTCACCTTCATCATCCACCCCTTTACCTTTCTTCATCTCAAACACTCTTCCTTTCCATGCAAAACCCAATCTTTCCGTCAAACTCAATTGCACCCTGCAAAAGTCCCAGTTTTGGGGAAGAAATTTGAGTTGGGTCCCATCACAATCGCCGCATGGAAGACCGAAATTTGATGCGGCGAGGCCCATAATAACAGCGGCGGTGAAGAGAAGGAAAGAGATTCCGTTTGACAATGTGATTCAGAGAGACAAGAAGCTGAAATTCGTTCTGAGGGTGAGGAATATTCTGGTGGCTCAACCAGATAGGGTTATGTCGCTTAAGCAGCTTGGCAAGTTCAAAAGAGATTTGGGGCTCGATAAAAGGAGGAAACTTATTGCCATACTGAAGAAATTCCCAGCAGTGTTTCAGATTATGGAAGAAGGGGTTTACTCTCTCAAATTCAAAATGACCCCTGAAGCTGAGAGACTCTATTTTGAGGAGCTGAAGATTAGGAATGAGTTGGAAGACTTGGTGGTCGTCAAACTCAGGAAGTTGTTGATGATGTCACTGGAAAAACGGATTTTGTTAGAGAAAATAGCACATCTCAGGACTGATTTTGGTCTCCCCGTGGGATTTCGTGACACCATTTGTCATAGGTACCCTCAGTACTTCAAAGTGGTTGCAACTGAGCGTGGCCCTGCCTTGGAACTAACTCATTGGGACCCTGAGCTTGCGGTTTCAGCGGCTGAGCTATCGGCTGAGGATAATCGCATCAGGGAAATGGAGGAGCAGAATTTGATCATAGACAGACCTCCCAGGTTCCACAGGGTGAAGCTTCCTAAGGGTCTTAATCTTTCCAAGGGTGAGATGAGGAAGATTATGCAATTCAGAGACTTGCCTTATATTTCGCCTTACTCTGATTTCTCTGCAATGAGGCCAGGGACAAGGGAGAAGGAGAAACATGCTTGTGGAGTTGTTCATGAGATTCTGAGTCTCACACTTGAGAAGCGGACGCTTGTTGATCACTTCACACATTTTCGCGAGGAGTTCAGATTCTCTCAGCAGCTGAGGGGGATGTTGATAAGGCATCCTGATATGTTTTATGTCTCTCTGAAAGGAGATAGAGATTCTGTGTTTCTGAGGGAAGCTTACCGGGACTCTCAGTTGGTGGACAAGGATCGGTTGTTGCTTGTAAAGGAAAAGCTTCGTGTCCTGGTTAATGTTCCGCGATTCCCCAAGGGACCTGCTCGCAAGACCCTTGAAGATAGCTTGAGAGAAGGTGATGGCAGAGAAGATGAAAGTGATCAAGGAGAAGAAGCATGGTCAGAAGAAGTTGATAATTTAGAGAGTGACGAAGGATTTGAGGATTTTGATGATGGTGATGATGGCTGGAGTGATGAAGAAGAAGATGACAGTTTGCCACCAGATTTTGATGACGATGGTGAAGTATTGGAGATTGGACAAGGAAAGGCAAATAAACAAGTTAAATACACGAGACAGAATGATGAAGAGGCCCTTCTTCCTGTATTCTCCGATGGCCGTCCCAGAGAACAGTGGTGA 1560 0.4545 MEPSLVLSSPSSSTPLPFFISNTLPFHAKPNLSVKLNCTLQKSQFWGRNLSWVPSQSPHGRPKFDAARPIITAAVKRRKEIPFDNVIQRDKKLKFVLRVRNILVAQPDRVMSLKQLGKFKRDLGLDKRRKLIAILKKFPAVFQIMEEGVYSLKFKMTPEAERLYFEELKIRNELEDLVVVKLRKLLMMSLEKRILLEKIAHLRTDFGLPVGFRDTICHRYPQYFKVVATERGPALELTHWDPELAVSAAELSAEDNRIREMEEQNLIIDRPPRFHRVKLPKGLNLSKGEMRKIMQFRDLPYISPYSDFSAMRPGTREKEKHACGVVHEILSLTLEKRTLVDHFTHFREEFRFSQQLRGMLIRHPDMFYVSLKGDRDSVFLREAYRDSQLVDKDRLLLVKEKLRVLVNVPRFPKGPARKTLEDSLREGDGREDESDQGEEAWSEEVDNLESDEGFEDFDDGDDGWSDEEEDDSLPPDFDDDGEVLEIGQGKANKQVKYTRQNDEEALLPVFSDGRPREQW 519
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian9g01548 519 MobiDBLite consensus disorder prediction 432 482 - -
Vian9g01548 519 MobiDBLite consensus disorder prediction 416 431 - -
Vian9g01548 519 PANTHER PROTEIN WHAT'S THIS FACTOR 1 HOMOLOG, CHLOROPLASTIC 69 436 IPR045040 GO:0003723
Vian9g01548 519 MobiDBLite consensus disorder prediction 416 483 - -
Vian9g01548 519 Pfam Plant organelle RNA recognition domain 80 407 IPR021099 GO:0003723
Vian9g01548 519 Coils Coil 244 264 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian9g01548 Vian-Chr9 31765660 31767219 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian9g01548 - - gmx:100810556 831.632