Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian9g01524 ATGGAAGCATGTAAAGAATTTTTCAGAACAGCCTATAGTTTTATGTACCTGATAGGTACATATTTGAAGCCACATGTGGCACTTCTTAATGGCATTACCATGGGTGGTGGGGCTGGGGTTTCAATCCCTGGGACATTCCGTGTTGCAACAGACAAAACTATTTTTGCTACCCCTGAAGTTCATATTGGATTCCACCCTGATGCTGCAGCATCTTTTTACCTTTCACATTTACCTGGTCATTTAGGAGAGTACTTGGCTCTGACAGGGGAAAAGCTCAATGGAGTAGAGATGGTTACTTGCGGGCTTGCTACACACTATTCATTAAATGCAAGGCTTCCTTTAATTGAAGAACAGTTGGGGAAATTAGTTACCGATGACCCATCTGTCATTGAAGCCACTTTAGAACATTATGGGGACCTTGTACATCCAGACAGCAGTAGCGTACTACAAAGGATTGAAATTCTAGATAAATGCTTTTGCCATGACTCAGTTGAAGAGATTGTTGATGCTATGGAAAATGCAGCAAGTGAAACAAAAGATGCTTGGTGCATTTCTACCCTAAATAGACTCAAAGAAGCCTCTCCATTGAGCTTGAAGGTTGCCTTGAGATCTATAAGAGAAGGTACATTTCAGACTCTTGATCAATGTTTGCTGCGTGAGTACCGTATGACTTTACAAGCAATACATGGGCAAATATCTGGAGATTTCTGTGAAGGAGTAAGGGCACGCGTGGTGGACAAGGACTTTGCACCAAAGTGGGATCCTCCAACCTTAGAAAAGGTGTCTCAAGACATGGTGGATCAGTACTTCTTACCTTTGAGTGAGTCTGAACCTGATCTAGAGCTGCCCACAAAAAGTCGTGAAGCATTTCTATAG 876 0.4235 MEACKEFFRTAYSFMYLIGTYLKPHVALLNGITMGGGAGVSIPGTFRVATDKTIFATPEVHIGFHPDAAASFYLSHLPGHLGEYLALTGEKLNGVEMVTCGLATHYSLNARLPLIEEQLGKLVTDDPSVIEATLEHYGDLVHPDSSSVLQRIEILDKCFCHDSVEEIVDAMENAASETKDAWCISTLNRLKEASPLSLKVALRSIREGTFQTLDQCLLREYRMTLQAIHGQISGDFCEGVRARVVDKDFAPKWDPPTLEKVSQDMVDQYFLPLSESEPDLELPTKSREAFL 291
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian9g01524 291 FunFam Probable 3-hydroxyisobutyryl-CoA hydrolase 2 1 286 - -
Vian9g01524 291 CDD crotonase-like 5 105 - -
Vian9g01524 291 Gene3D - 1 286 - -
Vian9g01524 291 SUPERFAMILY ClpP/crotonase 3 256 IPR029045 -
Vian9g01524 291 PANTHER 3-HYDROXYISOBUTYRYL-COA HYDROLASE-RELATED 2 286 IPR032259 GO:0003860
Vian9g01524 291 Pfam Enoyl-CoA hydratase/isomerase 5 270 IPR045004 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian9g01524 Vian-Chr9 31414511 31419987 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian9g01524 2 291 Acyl Lipid Metabolism Gene Families AT4G31810 66.212 8.55e-148 419
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian9g01524 K05605 - gmx:100801676 541.191
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian9g01524 9 31414511 31419987 Vian9g01524 9 31414511 31419987 ECH