Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian9g01508 ATGGCTCAAGCAATGGCATCAATGGCAGGTAGCCTTCAACTCAGTGGCTCCACACGTTTGCATGCCAAAAGGGTGTCTTCAGTCACACGTGCGGGATTCACAGTTAGAGCACAACATCAGCAAGAACAAGTGAGTGGTGATGCTCAGAGCAGCCGTAGGACAGTGCTTTCTCTTGTTGCTGCTGGTTTGGCCACTGGCTCCTTTGTTCAAGCTGTTCTTGCTGATGCCAAATCCATCAAAGTTGGACCACCTCCTCCACCTTCTGGTGGATTGCCTGGAACCTTGAACTCAGATGAAGCAAGAGACCTTGATCTGCCACTGAAAGATAGGTTCTTCCTTCAACCACTGTCTCCTAGCGAGGCTGCACAAAGGGCAAAGGAATCAGCCAAAGAAATTGTTGCTGTTAAGTCTTTAATAGAAAAGAAGGCTTGGCCATATGTTCAGAATGATCTGCGTCTCAGGGCTGAGTATCTGCGGTTTGATCTCAACACTGTCATTGCTGCAAAGTCTAAGGATGAGAAGAAATCACTCAAGGAACTCACGGGCAAGCTCTACGAGAATATCAGCAATCTGGATCATGCAGCAAAAATTAAGAGCAGCCCAGAAGCAGAGAAGTACTATGCTGCTACTGTTTCTACTCTGAATGATGTTCTTGCGAAGCTTGGTTAA 669 0.4694 MAQAMASMAGSLQLSGSTRLHAKRVSSVTRAGFTVRAQHQQEQVSGDAQSSRRTVLSLVAAGLATGSFVQAVLADAKSIKVGPPPPPSGGLPGTLNSDEARDLDLPLKDRFFLQPLSPSEAAQRAKESAKEIVAVKSLIEKKAWPYVQNDLRLRAEYLRFDLNTVIAAKSKDEKKSLKELTGKLYENISNLDHAAKIKSSPEAEKYYAATVSTLNDVLAKLG 222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian9g01508 222 Pfam Oxygen evolving enhancer protein 3 (PsbQ) 26 222 IPR008797 GO:0005509|GO:0009523|GO:0009654|GO:0015979|GO:0019898
Vian9g01508 222 Gene3D - 75 222 IPR023222 -
Vian9g01508 222 FunFam Oxygen-evolving enhancer protein 3 75 222 - -
Vian9g01508 222 PANTHER OXYGEN-EVOLVING ENHANCER PROTEIN 3-1, CHLOROPLASTIC 1 222 IPR008797 GO:0005509|GO:0009523|GO:0009654|GO:0015979|GO:0019898
Vian9g01508 222 MobiDBLite consensus disorder prediction 80 99 - -
Vian9g01508 222 SUPERFAMILY Oxygen-evolving enhancer protein 3, 111 221 IPR023222 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian9g01508 Vian-Chr9 31180051 31181831 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian9g01508 K08901 - gmx:100306034 346.665