Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian9g01484 ATGGGGAACGAAGAAGAAGAGGAATTGGTGGCTGAAGTTGAAGCAGTGGAAGCCGTGTATGGAACCGATTGCACCGTTCTCAGTTCATTTCCTCCCCATTTTCACCTCTTTCTCAAACCCAGAACTGCTGATGTTTCCTCCCAACAGTTTGTGGAAGCTGTTCTGGAGATAAAAGCTACCTCACAGTATCCAAAAGAACCACCTTCTATTGAGCTTGTGGATTGCAAGGGTCTGGATGAACAGAGACAGAAACATCTATTAAATTACATACAAAGTAAAGCCTGTGAGATCTCCCCTTGTTTAATGCTTGTAGCTCTTTGTGAGGAAGCTGTTGAGAAACTGTCAGCTATGAATCATCCTGATGGTGATTGTCCATTGTGTTTATTCCCTTTGGTCCCAGAAGATCAGCAAAGCGAAACTTTGCCTTTTATGAAGTTAATGTCTTGTTTTCATTGCTTCCACAGTGAATGTATCATTAGATGGTGGAAATGGCTTCAAAGTTTTAAAGAACCCGACTCTGCCAATACAGACAGTGCAGCTGCACATCGGAACCATGACAATCATAAGAAAATGGAAGAGAGTGTCGGAAACTGCCCTGTCTGTCGCAAACCTTTTCTTGCCAAGGATTTGGACCATGTGCTTGCCCTAGTTGGATCATACTCTTCCCAATCGACTTCAGACAATGAAGAACTCAACGGTGAAGATACGCTCCTTCAATCAGAGAATGAGATCATTAGGAGACAAAAATTTGAAGCCATCCTAAATTTACAGAAGGAGAACACTGGCTTGATTGAACCCAAAAAAGATATATTCATATTACCTGGTATGTATCTTCCACAACCAGTTGCAATGCCGAGCTCGACATCAACCAAGGAATCTGGTGAGCAGACAGAAAATGAACCACCTGCAGTTGTGTCAGCAAAACATGTCGGTGGGACATCCAATGGACCTAGTTCTAGCAGGCAGAGGAATTTCGGTCAAAGGAGGCAGAGAGCAAGAAGTGATAACCACTCTAGTTCAACTGTAAGAAATCCAAGAAAACCAGTTCAACAGTGGGTAAGAAGAGATACTCCCAGCAATAAGCAATAG 1089 0.4288 MGNEEEEELVAEVEAVEAVYGTDCTVLSSFPPHFHLFLKPRTADVSSQQFVEAVLEIKATSQYPKEPPSIELVDCKGLDEQRQKHLLNYIQSKACEISPCLMLVALCEEAVEKLSAMNHPDGDCPLCLFPLVPEDQQSETLPFMKLMSCFHCFHSECIIRWWKWLQSFKEPDSANTDSAAAHRNHDNHKKMEESVGNCPVCRKPFLAKDLDHVLALVGSYSSQSTSDNEELNGEDTLLQSENEIIRRQKFEAILNLQKENTGLIEPKKDIFILPGMYLPQPVAMPSSTSTKESGEQTENEPPAVVSAKHVGGTSNGPSSSRQRNFGQRRQRARSDNHSSSTVRNPRKPVQQWVRRDTPSNKQ 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian9g01484 362 MobiDBLite consensus disorder prediction 311 325 - -
Vian9g01484 362 FunFam eIF-2-alpha kinase GCN2 2 123 - -
Vian9g01484 362 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 120 216 IPR013083 -
Vian9g01484 362 PANTHER RING FINGER PROTEIN 25 3 348 IPR039133 GO:0061630
Vian9g01484 362 MobiDBLite consensus disorder prediction 337 362 - -
Vian9g01484 362 MobiDBLite consensus disorder prediction 283 300 - -
Vian9g01484 362 SUPERFAMILY UBC-like 5 114 IPR016135 -
Vian9g01484 362 Gene3D Ubiquitin Conjugating Enzyme 2 119 IPR016135 -
Vian9g01484 362 SMART ring_2 124 201 IPR001841 -
Vian9g01484 362 MobiDBLite consensus disorder prediction 283 362 - -
Vian9g01484 362 ProSiteProfiles Zinc finger RING-type profile. 124 202 IPR001841 -
Vian9g01484 362 SMART RWD2001b 11 117 IPR006575 GO:0005515
Vian9g01484 362 ProSiteProfiles RWD domain profile. 11 117 IPR006575 GO:0005515
Vian9g01484 362 FunFam RWD domain-containing protein 120 217 - -
Vian9g01484 362 SUPERFAMILY RING/U-box 116 208 - -
Vian9g01484 362 Pfam RWD domain 8 113 IPR006575 GO:0005515
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian9g01484 K10640 - gmx:100791789 603.979
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian9g01484 9 30894482 30901343 Vian9g01484 9 30894482 30901343 ECH