Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian9g01477 ATGGCAAAAGCAATTGCAGCTTCTTTCTTGGTTCTCATGCTCGCTTTTCCCACTGTCTTTGGTGTTGACTATGATGTTGGTGACAGTAATGGATGGGCCTCACAGGTTGATTACACCACCTGGGTCTCTGGGAAAACTTTCCATGTTGGTGACAACTTGGTGTTCAAGTATGATTCCAGCCATGAAGTTGATGAGGTTAATGAGAGTGGCTACAGCAGTTGCAGTTCAAGCAACCTCATCAAGAACCACAATGATGGAAACAGCAAAATTGCATTGTCTGCAACTGGGAACAGGTACTTCATATGCCCCAGAGCAGGGCACTGTGCCGGAGGCATGAAGCTGCAGATCAATGTGGTGGCTGCCAATTCCACCACCCCAACCACCCCTTCAACCCCTTCAACACCGTCTTCTCCGCCGTCTGAGTCAGGGACACCTTCAACCACCAACAGTACTTCACCACCGTCAACTAACGGAGCAGTTGGAGTTTCCGGCAGCATTGGGCTTCTGGCGGCTGCTTCGGCAGTTGTTCTTGGTTTCATGGGCTAG 546 0.5018 MAKAIAASFLVLMLAFPTVFGVDYDVGDSNGWASQVDYTTWVSGKTFHVGDNLVFKYDSSHEVDEVNESGYSSCSSSNLIKNHNDGNSKIALSATGNRYFICPRAGHCAGGMKLQINVVAANSTTPTTPSTPSTPSSPPSESGTPSTTNSTSPPSTNGAVGVSGSIGLLAAASAVVLGFMG 181
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian9g01477 181 SUPERFAMILY Cupredoxins 21 119 IPR008972 -
Vian9g01477 181 PANTHER BLUE COPPER PROTEIN 21 132 IPR039391 GO:0009055
Vian9g01477 181 Pfam Plastocyanin-like domain 32 112 IPR003245 GO:0009055
Vian9g01477 181 CDD Phytocyanin 22 118 - -
Vian9g01477 181 MobiDBLite consensus disorder prediction 123 158 - -
Vian9g01477 181 ProSiteProfiles Phytocyanin domain profile. 22 120 IPR003245 GO:0009055
Vian9g01477 181 FunFam Blue copper 20 124 - -
Vian9g01477 181 Gene3D - 21 125 IPR008972 -
Vian9g01477 181 MobiDBLite consensus disorder prediction 140 158 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian9g01477 Vian-Chr9 30789916 30790619 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian9g01477 17 121 Miscellaneous Gene Families AT3G60280 49.524 9.22e-34 117
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian9g01477 - - gmx:100803164 207.223
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian9g01477 9 30789916 30790619 Vian9g01477 9 30789916 30790619 ECH