Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian9g01441 ATGTATGGCGGTGATGAAGTATCAGCTATTGTACTTGACTTGGGTTCACACACGTGTAAAGCTGGTTATGCCGGTGAAGATGCTCCCAAGGCCGTGTTTCCGTCTGTTGTTGGAGCTATTGATCAAATGGATGTTGATGAAGCAGATGATGATGCCGAGAAGAACTCTGCCTCAGTTGGGGAATCAAAGAATAATCTTAAAAATGCTGATTCTGACAAGGCTAAGGGAAAGAGGAAATTGTTTGTAGGATCACAGTCCTTGGGCTACCGTAGAGATCATATGGAGGTGCTGTCTCCATTCAAGGATGGAATTGTAGCTGACTGGGATATTGTTGATAGCATATGGGATCAGGCCTTCAGGGAGTGCCTATTGATTGATCCTAAAGAGCATCCTATGCTCCTGGCAGAACCTTCTTCAAACTCTCAACAGCAGAGAGAAAGGACAGCGGAGCTTATGTTTGAGAAGTACAAAGCACCTGCATTGTTTTTGGCAAAGAATGCTGTTCTGACTTCCTTTGCATCAGGGCGTGCTACATCATTGGTTGTTGATGGTGGTGGAGGGTCCACTACAATTGCACCAGTACACGATGGTTATGTTATTCAGAAGGCTGTGGCAACTTCCCCAATTGGAGGAGAATTTCTTACAGATTGCTTGATGAAAAGCTTGGAAAGCAAGGGTATTACGATGAAACCACGTTATTCCTTTAGGAGAAAGGAAATACGCCCTGGAGAGTTTCAGACGGTAGATCTTGATTTTCCAAATACAACTGAAAGCTACAAACTCTATTCACAGAGGGTGATTGCTAGTGATGTCAAGGAATGTGTGTGCCGTGCTCCAGATACTCCTTACGATGAGAGTGCATATTCAAACATCCCAATGACCTCGTATGAGCTTCCTGATGGCCAGACAATTGAAATTGGAGCTGACAGATTTAAGATTCCAGATGTTCTTTTCAACCCGTCACTGGTTCAGTCAATTCCTGGCATGGAGAGCTTTGCTGAAATTGCTCCTTTAGTTCGTGGCCTTCCTCAAATGGTCATTGAAAGCATTAACAAGTGTGATGTAGACATTCGAAGAGAGTTGTTTAGTAGTATACTGCTTGCTGGTGGTACAGCTTCAATGCAACAACTGAAAGAACGACTTGAGAAAGACTTACTAGAGGAGTCCCCTCAAGCTGCCAGAGTAAAAGTATTGGCCAGTGGGAATGCAACTGAAAGAAGGTTTAGTGTTTGGATAGGGGGTAGTATATTGGCATCTCTTGGCTCCTTCCAGCAAATGTGGTTCTCCAAATCCGAGTATGAGGAGCATGGAGCTTCATATATCCAAAGGAAGTGTCCGTGA 1341 0.4407 MYGGDEVSAIVLDLGSHTCKAGYAGEDAPKAVFPSVVGAIDQMDVDEADDDAEKNSASVGESKNNLKNADSDKAKGKRKLFVGSQSLGYRRDHMEVLSPFKDGIVADWDIVDSIWDQAFRECLLIDPKEHPMLLAEPSSNSQQQRERTAELMFEKYKAPALFLAKNAVLTSFASGRATSLVVDGGGGSTTIAPVHDGYVIQKAVATSPIGGEFLTDCLMKSLESKGITMKPRYSFRRKEIRPGEFQTVDLDFPNTTESYKLYSQRVIASDVKECVCRAPDTPYDESAYSNIPMTSYELPDGQTIEIGADRFKIPDVLFNPSLVQSIPGMESFAEIAPLVRGLPQMVIESINKCDVDIRRELFSSILLAGGTASMQQLKERLEKDLLEESPQAARVKVLASGNATERRFSVWIGGSILASLGSFQQMWFSKSEYEEHGASYIQRKCP 446
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian9g01441 446 Gene3D Actin; Chain A, domain 4 211 324 - -
Vian9g01441 446 MobiDBLite consensus disorder prediction 46 72 - -
Vian9g01441 446 Pfam Actin 4 445 IPR004000 -
Vian9g01441 446 SUPERFAMILY Actin-like ATPase domain 175 445 IPR043129 -
Vian9g01441 446 Gene3D - 182 385 - -
Vian9g01441 446 Gene3D - 1 181 - -
Vian9g01441 446 SUPERFAMILY Actin-like ATPase domain 5 182 IPR043129 -
Vian9g01441 446 FunFam Actin-related protein 4 1 184 - -
Vian9g01441 446 FunFam actin-related protein 4 388 446 - -
Vian9g01441 446 CDD NBD_sugar-kinase_HSP70_actin 101 205 - -
Vian9g01441 446 Gene3D - 391 446 - -
Vian9g01441 446 SMART actin_3 7 446 IPR004000 -
Vian9g01441 446 PANTHER ACTIN 9 439 IPR004000 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian9g01441 Vian-Chr9 30313157 30325333 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian9g01441 1 445 Miscellaneous Gene Families AT3G53750 35.714 6.57e-92 281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian9g01441 K11340 - gmx:100785066 827.78