Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian9g01418 ATGACGAGCATGGAGAGTTTGATCGGTTTGGTGAACAGAATCCAGCAGGCCTGCACCGTGCTCGGCGACTATGGCGGCGACGCCGATAACAACGCCTTCTCTTCTCTATGGGAAGCTCTTCCTTCTGTCGCCGTCGTCGGCGGTCAGGTCATCACCTTCACCATCACTAAACATGAACATGCTCTGTTCGTAGAAAGTTCGGGTAAGTCTTCGGTTCTGGAAAGCATCGTTGGACGTGACTTTCTTCCTAGAGGATCAGGAATTGTGACGAGGCGTCCATTAGTGTTGCAGCTTCACAAGGTTGATGGCAAAGCGAAGGAGTATGCAGAGTTTCTTCACATGCCAGGGAAAAAGATCACTGATTATGCTTTTGTTCGCCAGGAGATTCAGAATGAAACTGATAGAGTAACGGGGAAGACAAAGCAAATATCTCCTGTTCCAATTCACCTTAGCATTTACTCTCCACATGTTGTCAACCTAACTTTGATTGATTTACCTGGATTGACTAAAGTTGCTGTAGAGGGACAGCCTCAGACTATTGTTGAAGACATTGAAAATATGGTTCGGTCTTATGTTGAGAAGCCTAATTGTATTATACTGGCAATATCTCCGGCGAACCAGGACATAGCAACTTCGGATGCTATTAAGCTTTCGAAGGAGGTGGATCCCTCTGGTGAGAGGACATTTGGAGTGTTGACAAAACTGGATTTAATGGACAAAGGAACTAATGCATTGGATGTCCTTGAAGGAAGATCTTACCGTCTGCAACACCCCTGGGTTGGTGTAGTAAATAGATCCCAAGCAGATATCAATAAAAACGTTGATATGATTGTTGCTAGGCGTAAGGAGAGTGAGTATTTTGAAACCAGTCCTGACTATGGACACTTAGCCAATCAAATGGGTTCCGTATACCTTGCAAAGCTTCTCTCACAGCATTTGGAGTCAGTAATTAGGGCACGAATACCCAGTATAACATCTTTGATAAACAAAACAATTGAAGAACTTGAATCAGAGATGAATCAGATTGGGAGACCAATTGCTCTTGATGCTGGGGCTCAACTATACACCATCCTAGAACTATGCCGCGCATTTGATAAGATATTCAAGGAGCATTTAGACGGAGGGCGATCAGGTGGAGATAAAATCTATAATGTCTTTGATAATCAGCTTCCTGCTGCGTTACGGAAGCTTCCATTTGACCGTCATCTATCTCTTCAAAATGTAAGGAAAGTGGTATCAGAGGCAGATGGTTACCAGCCTCACTTAATTGCCCCAGAGCAAGGTTACCGTCGCCTGATCGAGGGAGCTCTCAGCTACTTTAGAGGCCCTGCTGAAGCTTCAGTTGATGCAGTTCACTTTGTCTTGAAAGAACTTGTGAGGAAATCAATAGCTGAAACTCAGGAACTAAGACGTTTCCCAACTCTTCAAGCCGAACTAGCTGCAGCTACAAATGAGGCTTTAGAGAAGTTCCGTGAAGAGAGTAAGAAGACAGCTATTCGACTGGTCGACATGGAAGCTACGTATCTCACTGTGGAGTTCTTCCGGAGACTTCCTCAAGAAATGGAGAAAGCCGGAAATCCAGCTAATCAAGCTACCCCCAATGAGGATCGATATGGAGAAGGACATTACAGGAGGATTGGATCAAATGTGACTTCCTATATTGGTATGGTGTCAGACACTCTCAAGAACACTATTCCAAAGGCTGTGGTTTTTTGTCAAGTCAGAGAAGCAAAACTATCATTGCTAAACCATTTCTACACACAAATAGGGAAGAAAGAGCCTAAACAGCTATCCCAGTTGTTAGATGAAGACCCTGCCTTGATGGAGAGGAGGCAACAATGTGCCAAAAGGCTTGAACTGTATAAAGCAGCAAGGGATGAAATTGATTCTGTTTCCTGGGCACGATGA 1908 0.4434 MTSMESLIGLVNRIQQACTVLGDYGGDADNNAFSSLWEALPSVAVVGGQVITFTITKHEHALFVESSGKSSVLESIVGRDFLPRGSGIVTRRPLVLQLHKVDGKAKEYAEFLHMPGKKITDYAFVRQEIQNETDRVTGKTKQISPVPIHLSIYSPHVVNLTLIDLPGLTKVAVEGQPQTIVEDIENMVRSYVEKPNCIILAISPANQDIATSDAIKLSKEVDPSGERTFGVLTKLDLMDKGTNALDVLEGRSYRLQHPWVGVVNRSQADINKNVDMIVARRKESEYFETSPDYGHLANQMGSVYLAKLLSQHLESVIRARIPSITSLINKTIEELESEMNQIGRPIALDAGAQLYTILELCRAFDKIFKEHLDGGRSGGDKIYNVFDNQLPAALRKLPFDRHLSLQNVRKVVSEADGYQPHLIAPEQGYRRLIEGALSYFRGPAEASVDAVHFVLKELVRKSIAETQELRRFPTLQAELAAATNEALEKFREESKKTAIRLVDMEATYLTVEFFRRLPQEMEKAGNPANQATPNEDRYGEGHYRRIGSNVTSYIGMVSDTLKNTIPKAVVFCQVREAKLSLLNHFYTQIGKKEPKQLSQLLDEDPALMERRQQCAKRLELYKAARDEIDSVSWAR 635
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian9g01418 635 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 33 330 IPR027417 -
Vian9g01418 635 FunFam dynamin-related protein 1E 4 331 - -
Vian9g01418 635 Gene3D Dynamin, middle domain 355 611 - -
Vian9g01418 635 Pfam Dynamin central region 243 510 IPR000375 -
Vian9g01418 635 ProSiteProfiles Dynamin-type guanine nucleotide-binding (G) domain profile. 53 322 IPR030381 GO:0005525
Vian9g01418 635 ProSitePatterns Dynamin-type guanine nucleotide-binding (G) domain signature. 82 91 IPR019762 -
Vian9g01418 635 Gene3D - 4 331 IPR027417 -
Vian9g01418 635 PRINTS Dynamin signature 81 98 IPR022812 -
Vian9g01418 635 PRINTS Dynamin signature 154 171 IPR022812 -
Vian9g01418 635 PRINTS Dynamin signature 246 265 IPR022812 -
Vian9g01418 635 PRINTS Dynamin signature 204 222 IPR022812 -
Vian9g01418 635 PRINTS Dynamin signature 56 74 IPR022812 -
Vian9g01418 635 PRINTS Dynamin signature 223 239 IPR022812 -
Vian9g01418 635 FunFam Dynamin-related protein 1C 353 611 - -
Vian9g01418 635 Pfam Dynamin GTPase effector domain 540 631 IPR003130 GO:0003924|GO:0005525
Vian9g01418 635 SMART dynamin_3 4 273 IPR001401 GO:0003924|GO:0005525
Vian9g01418 635 SMART GED_2 538 631 IPR003130 GO:0003924|GO:0005525
Vian9g01418 635 PANTHER DYNAMIN 5 631 IPR022812 -
Vian9g01418 635 ProSiteProfiles GED domain profile. 543 635 IPR020850 -
Vian9g01418 635 CDD DLP_1 40 322 IPR001401 GO:0003924|GO:0005525
Vian9g01418 635 Pfam Dynamin family 66 234 IPR045063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian9g01418 Vian-Chr9 29919418 29926333 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian9g01418 - - gmx:100790977 1141.72
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian9g01418 9 29919418 29926333 Vian9g01418 9 29919418 29926333 ECH