Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian9g01398 ATGGATCCTCAGGCCTTCATCAGGTTGTCAATAGGTTCTCTGGGGTTGCGATGGACTGGAATTGAACTGCACACCGGAAAATCTGGAATTCAAACACTCTCACTACCTTGTGTTTGTGAGATTCGGCTTCGAGGTTTTCCTGTTCAAACATCTTCAGTCCCTGTGATATCCTCTGCAGAAGTTCCACCTGACACTCAGAACATTGCCTCTAGCTTTTACCTCGAGGAGTCTGATTTAAAAGCATTGTTAGCTCCTGGATGCTTCTCCAACACTCATGGTTGTTTGGAGATTGCTGTGTTTTCAGGGAGGAAGGCCTCCCATTGCGGAGTCGGCATCAAAAGGCAGCAAATAGGGATCTTTAAAATGCACGTCGACCCCGAGTGGGGTGAAGGAAAGCCGTTGATTCTTTTTAATGGGTGGATAGGTATTGGCAAGAACAAACAGGAGAATGGAAAGCCGGGTACCGAGCTACATCTAAAAGTGAAACTAGATCCTGACCCTAGATATGTATTCCAGTTTGAAGATATCACAACATTGAGTCCTCAGATAGTTCAACTGCAAGGATCTATCAAGCAGCCAATCTTCAGTTGCAAGTTTAGTAAGGACAGGGTTTCCCAGGTTGATCCGTTGAGTGCGTACTGGACAGGCTCTACTAACGAGATTTCTAACTTGGAGACAGAGAGGAGAGAAAGAAAGGGGTGGAAGGTGACGATACACGATCTCTCTGGCTCGGCCGTCGCTGCAGCCTTCATAACAACTCCCTTTGTTCCATCTTCAGGTTGTGATTGGGTTGCCAGATCCAACCCAGGGTCTTGGTTGATTGTTCGGCCAGACACAGGCCGATCCGAGAGCTGGCATCCATGGGGAAAGCTCGAAGCATGGCGTGAGCGTGGCATCAGAGATACCGTTTGCTGCAAGTTCCATCTTTTATCTGAAGCTCAAGAGGGAGGTGAACTCCTCATGTCTGAAATACACATAAGTGCTGAAAAGGGTGGAGAGTTTTTCATAGACACTGAGAAACATCTGAGAACTGTAACTGCAGCAGCAAGTCCAATACCAAGTCCACAAAGCAGTGGAGACTTTGGTGGACTGAGTCCATTGGTTGGAGGTTTTGTCATGAGTTGCAGGATTCAAGGAGAAGGAAAGCAAAGCAAACCGTTGGTCCAACTCGCAATGCGGCACGTGACATGCGTCGAGGATGCTGCCATCTTCATGGCACTTGCAGCAGCTGTGGACCTCAGTATCCAGGCATGTAAACCTTTCAGGAGGAAGGTGAGAAGAGGTTTCTGGCATTCTATGTGA 1302 0.4777 MDPQAFIRLSIGSLGLRWTGIELHTGKSGIQTLSLPCVCEIRLRGFPVQTSSVPVISSAEVPPDTQNIASSFYLEESDLKALLAPGCFSNTHGCLEIAVFSGRKASHCGVGIKRQQIGIFKMHVDPEWGEGKPLILFNGWIGIGKNKQENGKPGTELHLKVKLDPDPRYVFQFEDITTLSPQIVQLQGSIKQPIFSCKFSKDRVSQVDPLSAYWTGSTNEISNLETERRERKGWKVTIHDLSGSAVAAAFITTPFVPSSGCDWVARSNPGSWLIVRPDTGRSESWHPWGKLEAWRERGIRDTVCCKFHLLSEAQEGGELLMSEIHISAEKGGEFFIDTEKHLRTVTAAASPIPSPQSSGDFGGLSPLVGGFVMSCRIQGEGKQSKPLVQLAMRHVTCVEDAAIFMALAAAVDLSIQACKPFRRKVRRGFWHSM 433
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian9g01398 433 PANTHER OS08G0163500 PROTEIN 1 429 IPR010410 -
Vian9g01398 433 Pfam Protein of unknown function (DUF1005) 1 428 IPR010410 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian9g01398 Vian-Chr9 29661774 29663573 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian9g01398 - - gmx:100815012 812.372
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian9g01398 9 29661774 29663573 Vian9g01398 9 29661774 29663573 ECH