Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian9g01394 ATGGCAGAAGTGAGGAACAAGAAAGTGGTTCTGAGAGACCATGTGGTTGGTTTTCCGAAGGAATCAGACATGAACACTGTTGAAGGAAGAATCAGATTGAAGGTTCCAGAAGGTTCCAATGATGTGCTTCTAAAAAATCTGTACCTCTCTTGTGACCCTTACATGAGAATCCTGATGAACAAGGTGGAAAGCTTAGATGTGCATCATCACTACACACCTTCTTCTCCATTGTCAGGATATGGTGTGTCTAAAGTGGTAGAATCTGCACATTCAGATTATAAGAAAGGTGATTTAGTTTGGGGATTTACCAAATGGGAAGAGTATAGCTTTGTCTCCTCATCTCAGATATGTTTCAAAATTGCACACACTGATGTCCCACTTTCCTACTACACTGGAATTCTTGGTATGCCAGGATTGACTGCTTATGGTGGTTTCTTTGATATAAGTTCTCCCAAAAAAGGTGACAATGTTTTTGTTTCAGCTGCCTCTGGTGCTGTTGGTCACCTTGTTGGCCAATTTGCCAAGTTGAGTGGTTGTTATGTTGTTGGAAGTGCTGGAACCAAGGAGAAGGTGGATCTGTTGAAGAATAAATTAGGATTTGATGAAGCTTTTAACTACAAAGAAGAGTCTGACCTCAATGCAACTTTGAAAAGATACTTTCCAGAAGGCATTGATATATACTTTGAGAATGTTGGGGGGAAGACACTTGATGCAGTACTCCCAAATATGAGACTCCATGGTCGAATACCTGTTTGTGGAATGATCTCACAGTACAATCTTGCTCAACCAGAAGGTGTAACAAATTTGGCATATCTCATATTTCAGAGGGTTAAAATGGAAGGTTTTCTTATAACTGATTTCTTCCATTCATATCCCAAATTTTTGGACTTTGTCCTTCCTCTTATAAGAGATGGGAAGGTTGTGTATGTGGAAGACATTGTTGAGGGTCTTGAGAATGGCCCTGCTGCTTTGGTTGGCCTCTTTAGTGGTCGCAATGTTGGTAAACAAGTGGTTGTTGTTGCTCATGAGTAA 1032 0.4041 MAEVRNKKVVLRDHVVGFPKESDMNTVEGRIRLKVPEGSNDVLLKNLYLSCDPYMRILMNKVESLDVHHHYTPSSPLSGYGVSKVVESAHSDYKKGDLVWGFTKWEEYSFVSSSQICFKIAHTDVPLSYYTGILGMPGLTAYGGFFDISSPKKGDNVFVSAASGAVGHLVGQFAKLSGCYVVGSAGTKEKVDLLKNKLGFDEAFNYKEESDLNATLKRYFPEGIDIYFENVGGKTLDAVLPNMRLHGRIPVCGMISQYNLAQPEGVTNLAYLIFQRVKMEGFLITDFFHSYPKFLDFVLPLIRDGKVVYVEDIVEGLENGPAALVGLFSGRNVGKQVVVVAHE 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian9g01394 343 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 132 301 IPR036291 -
Vian9g01394 343 Gene3D - 10 338 - -
Vian9g01394 343 CDD double_bond_reductase_like 4 340 - -
Vian9g01394 343 SMART PKS_ER_names_mod 42 338 IPR020843 GO:0016491
Vian9g01394 343 SUPERFAMILY GroES-like 4 171 IPR011032 -
Vian9g01394 343 SUPERFAMILY GroES-like 286 338 IPR011032 -
Vian9g01394 343 Gene3D - 133 309 - -
Vian9g01394 343 FunFam Prostaglandin reductase 2 133 309 - -
Vian9g01394 343 PANTHER PROSTAGLANDIN REDUCTASE 4 340 IPR045010 GO:0016628
Vian9g01394 343 Pfam Zinc-binding dehydrogenase 165 298 IPR013149 -
Vian9g01394 343 Pfam N-terminal domain of oxidoreductase 7 115 IPR041694 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian9g01394 Vian-Chr9 29562501 29565419 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian9g01394 K19825 - gmx:100811802 582.408