Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian9g01389 ATGGCAGAAGTGAGGAACAAGCAAGTGGTTCTAAGGGACTATGTGGTTGGTTTTCCCAAGGAATCCGACATGAACACTGTCGAAGGAAGAATAACATTGAAGGTTCCAGAAGGTTCCAATGATGTGCTTCTCAAAAATCTCTACCTCTCTTGTGACCCTTACATGAGAGTCTTGATGAGCAAGATGGGCCATGAGGGATTTGGGTGCTACATACCTGGCTCTCCAATAGCAGGGTTGGGAGTGTCAAAAGTCCTAGAATCTGGACACCCAGATTACAAGAAAGGTGATTTAGTTTGGGGAATGACGAAATGGGAAGAATTCAGCTTGGTGCCTGCAACTCAAATAGATTTCAAAATTGAGCACACAGATGTCCCTCTTTCATATTATACTGGTATTCTTGGTATGCCAGGATTGACAGCTTATGTAGGTTTCTTTGAAGTGGGCTCTCCCAAGAAAGGGGAGAATGTTTTTATTTCAGCTGCTTCTGGTGCTGTTGGTCAACTTGTTGGTCAGTTTGCTAAATTGACTGGTTGCTATGTGGTTGGAAGTGCTGGAAGCAAAGAGAAGGTGGATCTTTTGAAGAATAAACTTGGATTTGATGGAGCTTTTAACTACAAAGAAGAGTCAGAACTCGATGCAACTTTGAAAAGATACTTTCCAGAAGGCATTGATATTTACTTTGAGAATGTTGGAGGCAAGACACTTGATGCAGTACTCCTTAACATGAAATTACATGGTCGCATACCTGTTTGTGGAATGATCTCACAGTACAATCTTTCTCAACATGAAGGTGTAACAAATTTGGCACATCTCATATTTAAGAGGATTAAAATGGAAGGGTTTGTTGTAAATGATTTCTACCATTCATATTCCAAATTCTTGGAGTTTGTTTTGCCTCATATTAGAGAAGGGAAGGTTGTGTATGTGGAAGACATTGCTGAGGGTCTTGAAAATGGCCCTGCAGCCTTGGTTGGTCTCTACACTGGTCGGAATGTTGGTAAGCAAGTGGTTGTTGTTGCTCGTGACTGA 1029 0.415 MAEVRNKQVVLRDYVVGFPKESDMNTVEGRITLKVPEGSNDVLLKNLYLSCDPYMRVLMSKMGHEGFGCYIPGSPIAGLGVSKVLESGHPDYKKGDLVWGMTKWEEFSLVPATQIDFKIEHTDVPLSYYTGILGMPGLTAYVGFFEVGSPKKGENVFISAASGAVGQLVGQFAKLTGCYVVGSAGSKEKVDLLKNKLGFDGAFNYKEESELDATLKRYFPEGIDIYFENVGGKTLDAVLLNMKLHGRIPVCGMISQYNLSQHEGVTNLAHLIFKRIKMEGFVVNDFYHSYSKFLEFVLPHIREGKVVYVEDIAEGLENGPAALVGLYTGRNVGKQVVVVARD 342
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian9g01389 342 SUPERFAMILY GroES-like 285 337 IPR011032 -
Vian9g01389 342 FunFam Prostaglandin reductase 2 132 308 - -
Vian9g01389 342 Gene3D - 132 308 - -
Vian9g01389 342 Pfam N-terminal domain of oxidoreductase 7 114 IPR041694 -
Vian9g01389 342 SMART PKS_ER_names_mod 22 337 IPR020843 GO:0016491
Vian9g01389 342 PANTHER PROSTAGLANDIN REDUCTASE 4 339 IPR045010 GO:0016628
Vian9g01389 342 Pfam Zinc-binding dehydrogenase 164 297 IPR013149 -
Vian9g01389 342 CDD double_bond_reductase_like 4 339 - -
Vian9g01389 342 SUPERFAMILY GroES-like 4 169 IPR011032 -
Vian9g01389 342 Gene3D - 8 337 - -
Vian9g01389 342 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 131 301 IPR036291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian9g01389 Vian-Chr9 29523326 29526064 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian9g01389 K19825 - gmx:100811802 597.045