Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian9g01386 ATGTCTTCGCAGCAACAGCAAATGCAGAACAGTGGCGGCGGCGGCGGCAGCGGCGGCAGCATGGGCATCCCAGCGAGCGAGATTTTCTGGACTCTGGCCGATAAAGCCGACAAAAAGTTCTCCAAAATCAGGGACATTCCTTTTTACCAGCGCAGCAGGCGTGATACGTACTTTTACAAGGTCTTCAAGGTTTACACACAATTGTGGAAGTTTCAGCAGGAGAATCGGCAGAAGCTAGTTGAAGCTGGGCTTAGGAGATGGGAAATTGGTGAGATTGCATCTCGCATTGGGCAACTGTATTTTGGGCAGTACATGCAAACAAGTGATGCAAATTATCTGTCAGAGTCATATATATTCTATGAGGCCATATTGACTCGGGAGTATTTTAAGGAGGGAATGTTTCAGGATGTGAATATTGCAAACAAACAATTGAGGTTTCTTGCTAGATTCATAATGGTGTGTTTGGTTTTGAATCGGAGGGAAATGGTACAACAATTGGTTAATCAGCTTAAAGTATTAGTTGATGAATGCAAGAGAGCATTCCAGGAAAGTGACTTTAAAGAATGGAAGCTGGTGGTTCAAGAAATAGTCAGATTTTTAAAAGCTGACACTGCTTTTATGAATCTCAGGCCCTTAAGATATAGTCTAGTTTTGGACTCTCATCCTGATACCTTGCCACATGTTCCTGCAGCCATTTCAAAGCGACATTTGAAACTACGAGATGCTGTATTAAGTAGCTTCCATGAAAATGAGGTAAAGTATTCAGAGCTCACAGTGGACACTTTTAGGATGCTTCAATGTCTGGAGTGGGAACCTAGTGGCTTATTTTACCAGTCCAGTGGTTCAAAACTTAGCCAGAATGGGGCTACTGGGACTAGTCGCATCAGTTACATCCAAGACATTGCTGATCCTACTTTACCAGAAAATCCGCGGAAAGCTGTATTATACCATCCTGCACTGACACATTTTATAGCCGTTCTTGCCACAATATGTGAGGAGCTTCCTTCTGATGGTATTCTCCTTGTGTATTTGTCAGCTTCAGGATATTGTAGTTCTCCTCAAAATGAATCTGGTTGCATACACCTTGGTTCTCATGGAGAGAGAGGATCAAACTGCGTATATCCTTCTGACTTTCTACCATTTACTAGAAGACCACTTCTTTTAGTCATTGATAATGACAATAGCAACGCATTTAAGGTGATAGCAGACGCAGAAAAGGGAGAGCCAGTTGCAATGCTCCTTTCACCAAGCTGTTCTCCTGCTGTGTCTGACTGCTCACATCATTCAAATGGGAGCCTATTCACCATGTTTCTTACAGCTCCGCTGCAAGCTTTCTGTCTTCTGATTGGACTTTCAGATACTGATATTGATTTGGTCTGTAATCAGTGCGCTCTTCCTTCATGCTAG 1407 0.43 MSSQQQQMQNSGGGGGSGGSMGIPASEIFWTLADKADKKFSKIRDIPFYQRSRRDTYFYKVFKVYTQLWKFQQENRQKLVEAGLRRWEIGEIASRIGQLYFGQYMQTSDANYLSESYIFYEAILTREYFKEGMFQDVNIANKQLRFLARFIMVCLVLNRREMVQQLVNQLKVLVDECKRAFQESDFKEWKLVVQEIVRFLKADTAFMNLRPLRYSLVLDSHPDTLPHVPAAISKRHLKLRDAVLSSFHENEVKYSELTVDTFRMLQCLEWEPSGLFYQSSGSKLSQNGATGTSRISYIQDIADPTLPENPRKAVLYHPALTHFIAVLATICEELPSDGILLVYLSASGYCSSPQNESGCIHLGSHGERGSNCVYPSDFLPFTRRPLLLVIDNDNSNAFKVIADAEKGEPVAMLLSPSCSPAVSDCSHHSNGSLFTMFLTAPLQAFCLLIGLSDTDIDLVCNQCALPSC 468
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian9g01386 468 Coils Coil 163 183 - -
Vian9g01386 468 Pfam Protein SCAI 32 355 IPR022709 GO:0003714|GO:0006351
Vian9g01386 468 Pfam Protein SCAI 359 458 IPR022709 GO:0003714|GO:0006351
Vian9g01386 468 PANTHER PROTEIN SCAI 22 356 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian9g01386 Vian-Chr9 29474408 29487614 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian9g01386 - - gmx:100810202 818.92
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian9g01386 9 29474408 29487614 Vian9g01386 9 29474408 29487614 ECH