Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian9g01355 ATGTCTTACCCCATCAAAACGATCGTCGTTTTGGTTCAAGAAAACCGTTCATTTGACCACATGTTGGGTTGGATGAAGTCCCTCAACCCGGAAATCGACGGGGTCACCGGTTCGGAGTCAAACCCAATTTCCACCTCGGAGCCAGGCTCGAACCGGGTTTATTTTTCCGACCAGTCTGATTTTGTTGAACCGGACCCGGGTCACACGATGGAGGATGTGTACGAACAAGTTTTCGGTGAACCGTGGAGCGAGTCCTCGACGACGAAGAAAGTGTCGCCGACAATGGACGGGTTCGCCCAAAACTCGGTGAAGCAAAAGAAGGGGTCAACCGCGGAGACAGTGATGAACGGGTACAAACCGGATCTGTTACCGGTTTATCGAGAGTTAGTTAAGGAGTTTGCGGTGTGTGATCGGTGGTTTGCTTCGGTTCCCGGTCCGACCCAACCGAACCGGCTATACGTGCACTCTGCGACGTCGTATGGGTTGACCACTCAGGATACGCAGAAACTTATTGGAGGTTTGCCACAGAAGACTATATTTGACTCTTTGGACGAAAATGGGTTCAGTTTTGGAATATATTACCAATACCCACCATCCACACTTTTTTATAGAAACCTTAGGAAAGTGAAATACATAGACAACTTTCATTTGTTCGATCCAAAGTTCAAGAAGCATTGTGAAGAAGGGAAATTGCCAAACTATGTGGTGATTGAGCAAAGATATTTTGACTTGCTATCACTACCTGCAAATGACGACCATCCGTCGCATGATGTTGCAGAGGGACAAAGGTTCGTGAAAGAAGTGTACGAGATACTAAGAAGAAGTCCTCAATGGAATGAAATATTGTTTGTGATAACATATGATGAACATGGAGGGTTCTATGATCATGTGCCAACGCCTGTCGATGGAGTTCCAAACCCAGATGACATTGCAGGTCCTCCACCATTCAACTTTCAGTTTGATAGACTTGGTGTTAGGGTTCCTACCATCATTGTTTCTCCATGGATTCAGGCAGGAAAAGTGTTGCATGAACCTTCTGGGCCATTCCCAACATCACAGTATGAACATTCATCAATACCAGCTACTGTGAAGAAAATGTTCAATCTTCCTCGGTTCTTGACAAAGCGTGATGCATGGGCTGGAACATTCGAAAATCTCTTATCTCTCACCGCTCCACGTACTGATTGTCCAGTGGAATTGCCGGATCCTATGAAACTACGAGAGGGTGGTGGCGAAGAAGATGCAGGATTGAGTGAGTTTCAAGAAGAACTGATATACTTGACAGCAACTTTAAATGGGGATCATAATAAGAGTACGTATCCGAAACTAACACAGAATTTAACTGTTTCAGAGGCAGTTAAATACTGTGAAAGTGCGTTTCAAACGTTCTTGAATGAGTGTGAGAAAGCAAAGGAAAGTAGAATTGATGGATCTGAAATTGTTCATTGTGCAAAGCCACACACAGCACCACAATCCAAAACTTTCTTGCACAAGATGTTGTCTTGTATATTGTGTAAAGATTGA 1524 0.4442 MSYPIKTIVVLVQENRSFDHMLGWMKSLNPEIDGVTGSESNPISTSEPGSNRVYFSDQSDFVEPDPGHTMEDVYEQVFGEPWSESSTTKKVSPTMDGFAQNSVKQKKGSTAETVMNGYKPDLLPVYRELVKEFAVCDRWFASVPGPTQPNRLYVHSATSYGLTTQDTQKLIGGLPQKTIFDSLDENGFSFGIYYQYPPSTLFYRNLRKVKYIDNFHLFDPKFKKHCEEGKLPNYVVIEQRYFDLLSLPANDDHPSHDVAEGQRFVKEVYEILRRSPQWNEILFVITYDEHGGFYDHVPTPVDGVPNPDDIAGPPPFNFQFDRLGVRVPTIIVSPWIQAGKVLHEPSGPFPTSQYEHSSIPATVKKMFNLPRFLTKRDAWAGTFENLLSLTAPRTDCPVELPDPMKLREGGGEEDAGLSEFQEELIYLTATLNGDHNKSTYPKLTQNLTVSEAVKYCESAFQTFLNECEKAKESRIDGSEIVHCAKPHTAPQSKTFLHKMLSCILCKD 507
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian9g01355 507 FunFam Non-specific phospholipase C1 230 415 - -
Vian9g01355 507 Pfam Phosphoesterase family 5 370 IPR007312 GO:0016788
Vian9g01355 507 PANTHER NON-SPECIFIC PHOSPHOLIPASE C4-RELATED 2 467 IPR007312 GO:0016788
Vian9g01355 507 Gene3D Alkaline Phosphatase, subunit A 1 180 IPR017850 -
Vian9g01355 507 Gene3D Alkaline Phosphatase, subunit A 231 409 IPR017850 -
Vian9g01355 507 SUPERFAMILY Alkaline phosphatase-like 172 345 IPR017850 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian9g01355 Vian-Chr9 28895004 28898537 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian9g01355 2 507 Acyl Lipid Metabolism Gene Families AT3G03530 61.437 0.0 659
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian9g01355 K01114 - gmx:100789421 915.22