Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Vian9g01299 | ATGGTCATGCAAGCTATGTTGGGTTCTTGGAATAAATCCACAGGAGGTGGAAAGCACATGGGCTCTGGGTTGGCGCAACGAGTTGGCATTAATGAAATTGCAGAAAGCATTATGGCCTTCAATACTAATTACAAGGATACAGGTCTCTTTGGTGTTTATGCTGTTGCTAAGAAGGATTGCTTGGATGACTTAAGCTATGCAATAATGAATGAGACAACCAAGTTGGCTTATAAGGTTTCACAAGATGATGTTATTCGAGCTCGTAATCAGTTGAAATCTTCACTCCTGCTCCACATAGATGGAACAAGTCCAGTAGCTGAAGATATTGGGCGCCAGCTACTCACCTACAACAGAAGAATACCATTTGCAGAATTATTTGCTAGAATTGATGCTGTTGATGCAAGCACAATAAAACGTGTTGCTAACAGATTTATTTATGACAAGGATATTGCAATTGCTGCTATGGGACCTATTCAGCGTTTGCCTGATTACAACTGGTTCAGACGAAGAACATACTGGAATCGATATTAG | 531 | 0.4049 | MVMQAMLGSWNKSTGGGKHMGSGLAQRVGINEIAESIMAFNTNYKDTGLFGVYAVAKKDCLDDLSYAIMNETTKLAYKVSQDDVIRARNQLKSSLLLHIDGTSPVAEDIGRQLLTYNRRIPFAELFARIDAVDASTIKRVANRFIYDKDIAIAAMGPIQRLPDYNWFRRRTYWNRY | 176 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Vian9g01299 | 176 | SUPERFAMILY | LuxS/MPP-like metallohydrolase | 1 | 166 | IPR011249 | GO:0046872 | |
| Vian9g01299 | 176 | Gene3D | - | 1 | 176 | - | - | |
| Vian9g01299 | 176 | Pfam | Peptidase M16 inactive domain | 2 | 91 | IPR007863 | - | |
| Vian9g01299 | 176 | PANTHER | METALLOPROTEASE | 1 | 162 | - | - | |
| Vian9g01299 | 176 | FunFam | Mitochondrial-processing peptidase subunit beta, mitochondrial | 1 | 176 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Vian9g01299 | Vian-Chr9 | 27856426 | 27858327 | Wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Vian9g01299 | K17732 | - | gmx:100800696 | 332.798 |