Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian9g01295 ATGTCTCGCACTCCTAACTACGAGTTCCAGGAATGGTGGAACAAGCAGCGTGAGAAGAACAACAACCTCGATCCCCTCAACGACGCCAAGCTCGACCACTCCCACTCCGCCTCTCCACCGCCCTTCACCGCCCTCGACGTTGACTCCTCCCCCTCCTCCTCCGTCGCATCCAAAAAAGAACGCTCCAGGAGCGCTCGCCAGCTCTCCTGGGTATGCCTTCTCAAATGCCAGCAGCTCGCCGCCTCGCTCGGCTGGCTCTACGGTGGCGTCTTCCACCTCGCCCGCACCGCGCACCGCCGGATCGCGGACTCAGCGTCGCTGCGGGGCGACTCGTCGCGGCTCTACCGCGCGATCCGCGTCTTCCTCGTGGTGGTGATTGTGCTCTTGGGGTTCGAGCTCGTCGCGTATTTCAAGGGGTGGCATTTCAGGCGCCCCGATCCCAGCGACGTCCTGGGCATGCTCGCCGTCGTTTACGCCGTGTGGGTCGACGTCCGCGCCCGGTACATGTCGCCGCCGTTGCAGAGCCTGGCGAATTTGTGCACCGTTTTGTTCATCGTGCAGTCGGTGGACAGGGTCGTTTTGATCTTGGGGTGCTTCTGGATCAAGTTTCGGAGGCTGAAGCCTGTGGCAAGTGTTGATTACGATGCTGTGGGTATTAGCGCGGAGGATTTCCCGATGGTGTTGGTTCAGATTCCCATGTGCAATGAGAGGGAGGTTTACCAGCAATCCATTGGAGCAGTTTGTATCCTGGATTGGCCAAAGGAGAGAATGCTCGTTCAGATTCTTGATGATTCTGATGAAGTAGATACCCAACAGCTTATCAAGGCAGAAGTGCATAAATGGCAACAAAGGGGTGTTAGGATAATATATAGGCACCGGCTTCTACGTACAGGCTACAAGGCAGGGAATCTTAAATCAGCAATGGGCTGTGATTATGTTAAGGATTATGAGTTTGTGGCAATTTTTGATGCTGATTTTCAGCCAACACCGGATTTCTTAAAGAAAACAGTGCCCTATTTCAAGGGAAGGGATGATTTGGCATTAGTTCAGGCAAGATGGGCATTTGTAAACAAGGACGAGAACTTGCTTACGAGATTGCAGAATATCAATTTGTCTTTCCACTTTGAGGTAGAACAACAGGTGAATGGTATCTTCCTTAACTTCTTTGGCTTTAATGGAACTGCTGGTGTGTGGAGAATAAAGGCCCTTGAGGAAAGTGGTGGTTGGTTGGAGCGAACGACTGTTGAGGATATGGATATTGCTGTTCGTGCTCATCTTTGTGGATGGAAGTTTATATTCGTCAATGATGTTAAGTGTCTTTGTGAACTTCCAGAGACCTACGAGGCATATAAGAAACAACAACACCGGTGGCATTCAGGTCCAATGCAGTTGTTTCGCTTATGTTTTTTTGATATACTTCGTTCAAAGGTTAGTTGGGCAAAGAAGTTCAATTTGATATTTCTTTTCTTCCTCCTGAGGAAACTTATCCTGCCATTTTATTCATTCACCCTATTCTGCATAATTCTTCCATTGACCATGTTCCTTCCCGAAGCTGAGCTCCCAGCCTGGGTTGTATGTTACATTCCTGGAGTTATGTCCCTCTTAAGTGTTCTCCCAGCTCCACGTTCATTTCCATTTATAGTTCCTTATCTTCTATTTGAGAACACTATGTCAGTAACTAAGTTCAATGCCATGGTATCTGGATTATTTCGCTTTGGAAGTTCTTATGAGTGGGTGGTTACAAAAAAGTTGGGAAGATCATCAGAGACAGATTTGGTTGCCTTTGAGAAAGAATCTGAACCCCTAATGCGATCTAACAGTCTCCATAGATCAAACTCAGATTCAGGCCTTGAGGAACTAAGCAAACTAGAATTGTCAAAGAAAACTGGGAAGACCAAGAGAAATCGTCTCTTCAGGAAAGAACTTTGTCTTGCATTTATTTTGTTGACTGCCTCAGTTAGAAGCTTACTATCTGCCCAAGGAATTCACTTCTACTTCCTCTTGTTTCAAGGGATAAGTTTTCTGGTTGTTGGTCTTGATTTGATCGGAGAGCAGGTAAGTTGA 2064 0.4782 MSRTPNYEFQEWWNKQREKNNNLDPLNDAKLDHSHSASPPPFTALDVDSSPSSSVASKKERSRSARQLSWVCLLKCQQLAASLGWLYGGVFHLARTAHRRIADSASLRGDSSRLYRAIRVFLVVVIVLLGFELVAYFKGWHFRRPDPSDVLGMLAVVYAVWVDVRARYMSPPLQSLANLCTVLFIVQSVDRVVLILGCFWIKFRRLKPVASVDYDAVGISAEDFPMVLVQIPMCNEREVYQQSIGAVCILDWPKERMLVQILDDSDEVDTQQLIKAEVHKWQQRGVRIIYRHRLLRTGYKAGNLKSAMGCDYVKDYEFVAIFDADFQPTPDFLKKTVPYFKGRDDLALVQARWAFVNKDENLLTRLQNINLSFHFEVEQQVNGIFLNFFGFNGTAGVWRIKALEESGGWLERTTVEDMDIAVRAHLCGWKFIFVNDVKCLCELPETYEAYKKQQHRWHSGPMQLFRLCFFDILRSKVSWAKKFNLIFLFFLLRKLILPFYSFTLFCIILPLTMFLPEAELPAWVVCYIPGVMSLLSVLPAPRSFPFIVPYLLFENTMSVTKFNAMVSGLFRFGSSYEWVVTKKLGRSSETDLVAFEKESEPLMRSNSLHRSNSDSGLEELSKLELSKKTGKTKRNRLFRKELCLAFILLTASVRSLLSAQGIHFYFLLFQGISFLVVGLDLIGEQVS 687
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian9g01295 687 MobiDBLite consensus disorder prediction 43 58 - -
Vian9g01295 687 Pfam Glycosyl transferase family group 2 319 513 IPR001173 -
Vian9g01295 687 MobiDBLite consensus disorder prediction 20 60 - -
Vian9g01295 687 PANTHER GLUCOMANNAN 4-BETA-MANNOSYLTRANSFERASE 9 159 684 - -
Vian9g01295 687 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 217 443 IPR029044 -
Vian9g01295 687 FunFam probable xyloglucan glycosyltransferase 5 219 443 - -
Vian9g01295 687 SUPERFAMILY Nucleotide-diphospho-sugar transferases 227 503 IPR029044 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian9g01295 Vian-Chr9 27684809 27693427 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian9g01295 1 687 Miscellaneous Gene Families AT3G07330 72.399 0.0 1031
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian9g01295 - - gmx:100801779 1208.36