Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian9g01277 ATGGAGCATTTGGGTCAGAATGGTTTGATCTCTGAGCTTGAAAATGGAGTCACTTTGTGCTGTGATGAACAGTGTTCTGAGAAAGAAATAGTTACAACTTCCATTCAGTATGCTGTCAAAGTGTTGTTGATGGGTTTAGGAGAAGATATCAACAGAGAAGGCATTAGAAAAACACCACTTCGTGTTGCCAAGGCCCTTTGTGAAGGAACCAGAGAGCTCCTAGAACAACCTTTAACTACTAATCTATTCAGCAACCAAAAATTCAAAAAAGGTTATGTTAAAAGTGTTAAGGAAATTGTGGAAGGTGCATTATTCCCTGAAGGCGGAGTAGAAAAGAACAAAGTTGGTGATGCAGGAGGAGTAGGTGGACTTGTGATTGTGAGAGACCTTGACTTTTACTCCTACTGTGAGTCTTGCATGCTACCATTCTATTTCAAGTGTCATGTGGGCTATGTCCCTTCTGCTCAAAGAGTTCTCGGTTTAAGCAAACTCTCTCGTGTCACCGATGTCTTTGCAAAACGTCTCCAAGAGCCTCAGCGTCTTGCAAATCAGGTCTGTTCCGCTTTGCATGAAGGAATACAACCCACAGGCGTTGCTGTTCTGCTTCAATGCAAACACATTCCCTTTCCAGACATGGAATCAAATTCTCTTCACTCAAACCACAAAGGGGTCCTGGGAATACTCGTTTCTTCAGGCTCTGGTGTTTTTCAAAACAAAGATGCAAACTTGTGGACTGACTTTTTCGGTCTCCTTAACTTTAGGGGCATTGACAAGGACAAAATTATTGATAAGGGGTCATTGGACCACTGTTGGTGTCCTTCTTTGTCTTCTAAAGTTTCACCAAAGAATCAAGAAATGAACCCTGCTATGGTCACTGCAGTAGTTTCAATTCTCAAGTCTTTAGGTGAGGATCCAACTAGGAAGGAATTACAAGGGACTCCTGCTAGATATACCAAGTGGCTGATGAACTTCCAATGTAGTAGCATTGAGAGGGCGCTGAATGGTTCGCTTGGGAATGGTGCTTTGAACACTAATGGGGTTGTAGGTTTTGATGAAAAGATACACTCAGAGCTGAACTTGCCTTTCTTGTCACAGTGTGAACATCATTTGCTTCCATTTTATGGTGTTGTTCACATAGGATACTACATTTCCAAAGGGTTTCATCCCATTGAGAAAAGGCTCTTGCAGTCAATAGTGCACTTTTATGGTATTAAGCTGCAGGTTCAAGAAAGGGTGACCAAGCAGATCGCAGAAACGGTTTCTGCATTGATAGGTGAAAATGTGATAGTAGTGGTGGAAGCAAGTCACACCTGTATGATTTCTCGGGGAATTGAGAAGTTCGGTAGTAATACTGCTACCATTGCTGCATTGGGACGCTTTTCGACTGACCTTGCTACAAAAACCGCATTCTTAGAGAGTATTCCAAATGATACATAA 1437 0.421 MEHLGQNGLISELENGVTLCCDEQCSEKEIVTTSIQYAVKVLLMGLGEDINREGIRKTPLRVAKALCEGTRELLEQPLTTNLFSNQKFKKGYVKSVKEIVEGALFPEGGVEKNKVGDAGGVGGLVIVRDLDFYSYCESCMLPFYFKCHVGYVPSAQRVLGLSKLSRVTDVFAKRLQEPQRLANQVCSALHEGIQPTGVAVLLQCKHIPFPDMESNSLHSNHKGVLGILVSSGSGVFQNKDANLWTDFFGLLNFRGIDKDKIIDKGSLDHCWCPSLSSKVSPKNQEMNPAMVTAVVSILKSLGEDPTRKELQGTPARYTKWLMNFQCSSIERALNGSLGNGALNTNGVVGFDEKIHSELNLPFLSQCEHHLLPFYGVVHIGYYISKGFHPIEKRLLQSIVHFYGIKLQVQERVTKQIAETVSALIGENVIVVVEASHTCMISRGIEKFGSNTATIAALGRFSTDLATKTAFLESIPNDT 478
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian9g01277 478 Gene3D - 350 477 IPR043133 -
Vian9g01277 478 Gene3D - 119 254 IPR043133 -
Vian9g01277 478 FunFam GTP cyclohydrolase 1 119 254 - -
Vian9g01277 478 SUPERFAMILY Tetrahydrobiopterin biosynthesis enzymes-like 21 252 - -
Vian9g01277 478 Gene3D - 21 78 IPR043134 -
Vian9g01277 478 PANTHER GTP CYCLOHYDROLASE I 26 207 IPR001474 GO:0003934|GO:0046654
Vian9g01277 478 Gene3D - 278 330 IPR043134 -
Vian9g01277 478 Pfam GTP cyclohydrolase I 36 207 IPR020602 -
Vian9g01277 478 Pfam GTP cyclohydrolase I 292 474 IPR020602 -
Vian9g01277 478 SUPERFAMILY Tetrahydrobiopterin biosynthesis enzymes-like 267 475 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian9g01277 Vian-Chr9 27164062 27168409 Dispersed/Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian9g01277 K01495 - gmx:100792675 664.07