Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian9g01251 ATGTACGCTGATCGCGTGGAGAATGGAGGGCGGAGGTCCGTGAAGGAACGCTTAAATGGGAATGGTATCAGTGACCCTACTAGGCACCACCAACAGCGTCAAATCACCGGCAAGAGGTCGAGGCAAGATGATAAGTGGGAACATGATCTCTTTGATGGTGATGAACCACGGATCACTAATCGCAAGGTTAGCGCTCAAGATCTACGCCTCAAGCTTCAAAGGAAAGGTCTTCAACCTGCATCTCAGAGTGGAAAGAGTTATGCTCCAAAGATGCGGGATCTTCGTGAAAGGCTATCAGGGACCATGACAGTACAACCTACCAATGTTGATCCGCCCAAATCAAAAACTGTTAAACCAAGCAGTAAAAGTGTTGGTGCTGAGGCCCCTGCAGCGCAGATCAAAAGGCCAGCTGACCCAGCTCCTAAAAGGTCACGGAAGGCTGATTCTTCAATTGATGACTTTTTGCTGTCCTTGGGTCTTGAAAAGTACATCATTACTTTTCAGGCTGAAGAAGTTGATATGACAGCTCTCAATCATATGACTGATGAAGATCTCAAGGCTATGGGCATACCAATGGGACCAAGAAAGAAGATACTTTTAGCATTGGAGTCGAAAGTCTGA 621 0.467 MYADRVENGGRRSVKERLNGNGISDPTRHHQQRQITGKRSRQDDKWEHDLFDGDEPRITNRKVSAQDLRLKLQRKGLQPASQSGKSYAPKMRDLRERLSGTMTVQPTNVDPPKSKTVKPSSKSVGAEAPAAQIKRPADPAPKRSRKADSSIDDFLLSLGLEKYIITFQAEEVDMTALNHMTDEDLKAMGIPMGPRKKILLALESKV 206
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian9g01251 206 PANTHER SCP160 85 202 - -
Vian9g01251 206 Gene3D - 148 206 IPR013761 -
Vian9g01251 206 FunFam Sterile alpha motif domain-containing protein 148 206 - -
Vian9g01251 206 ProSiteProfiles SAM domain profile. 146 206 IPR001660 GO:0005515
Vian9g01251 206 CDD SAM_superfamily 153 203 - -
Vian9g01251 206 MobiDBLite consensus disorder prediction 1 63 - -
Vian9g01251 206 MobiDBLite consensus disorder prediction 36 63 - -
Vian9g01251 206 SUPERFAMILY SAM/Pointed domain 149 203 IPR013761 -
Vian9g01251 206 Pfam SAM domain (Sterile alpha motif) 147 203 IPR001660 GO:0005515
Vian9g01251 206 MobiDBLite consensus disorder prediction 100 148 - -
Vian9g01251 206 MobiDBLite consensus disorder prediction 100 121 - -
Vian9g01251 206 SMART SAM_4 143 206 IPR001660 GO:0005515
Vian9g01251 206 MobiDBLite consensus disorder prediction 72 91 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian9g01251 Vian-Chr9 26466099 26480631 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian9g01251 41 205 Glycosyltransferase AT3G07170 60.479 9.30e-61 186
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian9g01251 - - gmx:100784706 335.88