Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian9g01223 ATGGAATTTCACCAAAATGGCACCAAAACCAAACCCCCTGAAATACCTCTCGTCAACGGTACCGCGTTAACTCACCTCAACTCGCTCTTCCAAACTCAGTTCTCCGCCAACATCGATCCTTCCAGAACTTTCGTCTCTAAGGTCAAGCGTCTCATTGTAAAGATTTACTTGTTTTATGTTCTTCTTGCATTATTTATGTTATTAACACATTTGTTTGGTGCATCATCTTCAATGAAGGTTGGGACAGCTGTTGTTACTCGAAGTGATGGAAGATTAGCACTGGGTAGAATTGGAGCTCTTTGTGAGCAGCTTAAAGAACTTAGCTCTCAAGGATTTGAAGTCATACTGGTAACTTCAGGTGCTGTTGGCCTTGGCAGGCAAAGACTTAGATATCGCAAATTGGCCAATAGCAGTTTTTCTGATCTTCAAAAGCCACAAGGTGAGCTTGATGGAAAAGCATGTGCTGCTGTTGGACAAAGTAGTCTCATGGCTCTCTATGATACCATGTTCAGCCAGCTTGATGTGACTTCTTCCCAACTTCTTGTGAATGATGGATTTTTTAGGGATGCTGGCTTCAGAAAACAACTTTCAGACACAGTGAACGCATTGTTAGATTTAAGGGTTATCCCCATTTTCAATGAAAATGATGCTGTTAGTACTAGGAAAGCACCATATGAGGATTCTTCTGGTATTTTCTGGGACAATGACAGTTTGGCTGGACTTTTAGCCTTAGAACTTAAAGCTGATCTCCTTGTTTTATTGAGTGATGTTGAGGGCCTTTACAGTGGTCCTCCAAGTGACCCAAACTCAAAGTTGATCCACACGTATGTAAAGGAGAAACATCAAGGGGAAATTACTTTTGGAGACAAGTCAAGATTGGGCAGAGGGGGCATGACTGCTAAAGTTAATGCTGCTGTTTGTGCTGCTCATGCTGGTATCCCTGTCATTATAACTAGTGGCTATGCTACAAACAACATCATACGAGTACTTCAAGGGGAAAGAATAGGTACTGTCTTTCATAAAGATGCTCATTTATGGAGCAATATAAAGGAAGAGAGTGCACGTGAAATGGCAGTTTCAGCACGTGTGAGTTCTAGAAGACTTCAGATCCTCAAATCTGAAGATAGGAGTAAAATATTATTGGCAATTGCTGATGCATTGGAGAAAAATGCAAGTGCAATAAGTCTTGAGAATGAAGCTGATGTTGCTGATGCGATCTCTAAGCTTGCAAAGTCTGTGCGAATGTTGGCATCTATGGAAGAACCAATTGGTCAAATTTTAAAAAGAACAGAGATAGCAGATAAACTCATCCTGGAGAAAATTTCATGTCCTTTGGGAGTCCTTCTGGTTATATTCGAGTCTCGACCTGATGCCCTTGTTCAGATAGCTGCATTGGCAATTAGAAGTGGGAATGGTTTACTGCTTAAAGGGGGAAAAGAAGCCCAACGATCAAATGCAATCTTACACAAGGTCATTACTTCGGTGATTCCAAATACTGTAGGTGACAATCTTATTGGGCTTGTGAATTCAAGAGATGAAATTCCATACCTACTTAAGCTTGATGATGTGATAGATCTTGTGGTCCCTAGAGGCAGTAATAAACTTGTTTCTCAAATCAAGGAGTCAACAAAAATTCCTGTTCTTGGACATGCTGATGGAATTTGTCATGTATATGTCGACAAATCAGCTAATATTGATATGGCAAAACAGATTATTAGAGATGCAAAGACTGATTATCCTGCAGCCTGCAATGCAATGGAAACTCTTCTTGTACACAAGGATCTATCAAATAATGGTGGACTTAATGAGCTTGTCCTTGAACTCCAACGTGAAGGTGTTAAACTGTACGGTGGGCCAAGAGCTAGTGGCTTAATAAACATTGTTGGAACAAGCGATTTTCATCATGAGTATAGTTCACTTGCTTGCACAGTTGAAATTGTAGAAGATGTATTGGATGCCATTAACCACATACATGAACATGGAAGTGCTCATACTGAATGCATTGTTACAGAAGATTGTGAAGTTGCTGAGGCTTTCTTAAGTCAAGTTGACAGTGCTGCTGTTTTCCACAATGCAAGTACACGATTTTGTGATGGAGCACGCTTTGGCCTTGGTGCAGAGGTTGGAATTAGCACAAGTCGAATTCATGCACGAGGTCCTGTAGGAGTAGAGGGTTTGTTGACAAACAGATGGATATTGAGAGGGAGTGGGCATGTGGTTAATGGAGATCAAGGAATCAATTACACTTACAAGGAATTGCCACTAGAAGCATAA 2274 0.4077 MEFHQNGTKTKPPEIPLVNGTALTHLNSLFQTQFSANIDPSRTFVSKVKRLIVKIYLFYVLLALFMLLTHLFGASSSMKVGTAVVTRSDGRLALGRIGALCEQLKELSSQGFEVILVTSGAVGLGRQRLRYRKLANSSFSDLQKPQGELDGKACAAVGQSSLMALYDTMFSQLDVTSSQLLVNDGFFRDAGFRKQLSDTVNALLDLRVIPIFNENDAVSTRKAPYEDSSGIFWDNDSLAGLLALELKADLLVLLSDVEGLYSGPPSDPNSKLIHTYVKEKHQGEITFGDKSRLGRGGMTAKVNAAVCAAHAGIPVIITSGYATNNIIRVLQGERIGTVFHKDAHLWSNIKEESAREMAVSARVSSRRLQILKSEDRSKILLAIADALEKNASAISLENEADVADAISKLAKSVRMLASMEEPIGQILKRTEIADKLILEKISCPLGVLLVIFESRPDALVQIAALAIRSGNGLLLKGGKEAQRSNAILHKVITSVIPNTVGDNLIGLVNSRDEIPYLLKLDDVIDLVVPRGSNKLVSQIKESTKIPVLGHADGICHVYVDKSANIDMAKQIIRDAKTDYPAACNAMETLLVHKDLSNNGGLNELVLELQREGVKLYGGPRASGLINIVGTSDFHHEYSSLACTVEIVEDVLDAINHIHEHGSAHTECIVTEDCEVAEAFLSQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTNRWILRGSGHVVNGDQGINYTYKELPLEA 757
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian9g01223 757 PRINTS Glutamate 5-kinase family signature 195 216 IPR001057 GO:0005524|GO:0016301
Vian9g01223 757 PRINTS Glutamate 5-kinase family signature 234 261 IPR001057 GO:0005524|GO:0016301
Vian9g01223 757 PRINTS Glutamate 5-kinase family signature 293 313 IPR001057 GO:0005524|GO:0016301
Vian9g01223 757 PRINTS Glutamate 5-kinase family signature 111 125 IPR001057 GO:0005524|GO:0016301
Vian9g01223 757 PRINTS Glutamate 5-kinase family signature 155 183 IPR001057 GO:0005524|GO:0016301
Vian9g01223 757 PIRSF P5C_synthetase 1 59 IPR005766 GO:0003824|GO:0006561
Vian9g01223 757 PIRSF P5C_synthetase 76 757 IPR005766 GO:0003824|GO:0006561
Vian9g01223 757 Gene3D - 77 346 IPR036393 -
Vian9g01223 757 SUPERFAMILY Carbamate kinase-like 78 339 IPR036393 -
Vian9g01223 757 NCBIfam glutamate 5-kinase 78 350 IPR005715 GO:0005737|GO:0006561
Vian9g01223 757 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 552 698 IPR016163 GO:0016620
Vian9g01223 757 PANTHER GLUTAMATE SEMIALDEHYDE DEHYDROGENASE 38 755 - -
Vian9g01223 757 NCBIfam delta l-pyrroline-5-carboxylate synthetase 78 756 IPR005766 GO:0003824|GO:0006561
Vian9g01223 757 FunFam Delta-1-pyrroline-5-carboxylate synthase 76 346 - -
Vian9g01223 757 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 364 738 IPR016162 GO:0016491
Vian9g01223 757 Pfam Amino acid kinase family 78 319 IPR001048 -
Vian9g01223 757 NCBIfam glutamate-5-semialdehyde dehydrogenase 361 729 IPR000965 GO:0004350|GO:0006561
Vian9g01223 757 SUPERFAMILY ALDH-like 352 739 IPR016161 GO:0016491
Vian9g01223 757 ProSitePatterns Glutamate 5-kinase signature. 291 308 IPR019797 GO:0004349|GO:0006561
Vian9g01223 757 ProSitePatterns Gamma-glutamyl phosphate reductase signature. 647 668 IPR020593 GO:0004350|GO:0006561
Vian9g01223 757 FunFam Delta-1-pyrroline-5-carboxylate synthase 552 698 - -
Vian9g01223 757 Pfam Aldehyde dehydrogenase family 348 596 IPR015590 GO:0016491
Vian9g01223 757 CDD ALDH_F18-19_ProA-GPR 355 736 IPR000965 GO:0004350|GO:0006561
Vian9g01223 757 Hamap Gamma-glutamyl phosphate reductase [proA]. 353 740 IPR000965 GO:0004350|GO:0006561
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian9g01223 Vian-Chr9 25718090 25728395 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian9g01223 K12657 - gmx:100797414 1231.85