Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian9g01068 ATGGCCGTCGTTGGCGTTCTCGCGCTACAAGGATCATTCAACGAGCACATAGCTGCTCTTAGAAGGTTAGGGGTGAAAGGTGTGGAGATTCGAAAACCGGAGCAGCTTCACACCGTTTCATCCCTCATCATCCCCGGTGGAGAAAGCACCACCATGGCTAAGCTCGCTGAGTATCATAACTTGTTTCCTGCTTTGAGAGAGTTTGTAAAAATGGGAAAGCCTGTTTGGGGAACCTGTGCAGGGCTTATATTCTTGGCAAACAAAGCTATAGGACAGAAGAGTGGTGGACAAGATTTGGTCGGGGGACTTGATTGTACAGTGCATAGAAATTTCTTTGGAAGCCAGATTCAAAGCTTTGAGGCAGAGCTTTCAGTGCCACAGCTTGCCTCCCAGGAAGGTGGTCCTGAAACATTTCGTGGAGTTTTTATTCGTGCACCGGCAATTCTTGAAGCAGGGCCAGAAGTTCAAGTGTTGGCTGATTATCCCGTATCTTCTGATAAATTATTAAGTTCTGACACTTCTACCGAAGACAAAAAGGAGAATGCTGAGGAAGAAAGTAAGGTTATTGTTGCTGTGAGACAAGGGAACATACTAGGGACTGCTTTCCATCCTGAATTGACAGCTGATACTCGATGGCATAGTTATTTTTTGAAAATGTCAAACGAGACTGGAGAAGAGGCTTCCTTAAGTAACCTTGTTCCTGCACAAGTCACCACAAGTCACTATCAACTGACCCGGAGTGACCTTCCTATCTTTCAATAG 762 0.4554 MAVVGVLALQGSFNEHIAALRRLGVKGVEIRKPEQLHTVSSLIIPGGESTTMAKLAEYHNLFPALREFVKMGKPVWGTCAGLIFLANKAIGQKSGGQDLVGGLDCTVHRNFFGSQIQSFEAELSVPQLASQEGGPETFRGVFIRAPAILEAGPEVQVLADYPVSSDKLLSSDTSTEDKKENAEEESKVIVAVRQGNILGTAFHPELTADTRWHSYFLKMSNETGEEASLSNLVPAQVTTSHYQLTRSDLPIFQ 253
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian9g01068 253 NCBIfam pyridoxal 5'-phosphate synthase glutaminase subunit PdxT 4 218 IPR002161 GO:0004359|GO:0042819|GO:0042823
Vian9g01068 253 Gene3D - 1 230 IPR029062 -
Vian9g01068 253 ProSiteProfiles Glutamine amidotransferase type 1 domain profile. 3 226 - -
Vian9g01068 253 CDD GATase1_PB 4 217 IPR002161 GO:0004359|GO:0042819|GO:0042823
Vian9g01068 253 PANTHER PYRIDOXAL 5'-PHOSPHATE SYNTHASE SUBUNIT SNO 1 223 IPR002161 GO:0004359|GO:0042819|GO:0042823
Vian9g01068 253 ProSiteProfiles PdxT/SNO family profile. 3 221 IPR002161 GO:0004359|GO:0042819|GO:0042823
Vian9g01068 253 Hamap Pyridoxal 5'-phosphate synthase subunit PdxT [pdxT]. 4 219 IPR002161 GO:0004359|GO:0042819|GO:0042823
Vian9g01068 253 MobiDBLite consensus disorder prediction 171 186 - -
Vian9g01068 253 ProSitePatterns PdxT/SNO family family signature. 41 51 IPR021196 -
Vian9g01068 253 FunFam Predicted protein 1 230 - -
Vian9g01068 253 Pfam SNO glutamine amidotransferase family 6 220 IPR002161 GO:0004359|GO:0042819|GO:0042823
Vian9g01068 253 MobiDBLite consensus disorder prediction 167 186 - -
Vian9g01068 253 SUPERFAMILY Class I glutamine amidotransferase-like 3 219 IPR029062 -
Vian9g01068 253 PIRSF Glut_amidoT_SNO 1 224 IPR002161 GO:0004359|GO:0042819|GO:0042823
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian9g01068 K08681 - gmx:100786227 442.195