Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian9g01057 ATGTCCATGGTCGGAAAAACCATGTCCATGGCGGCAACTTCGCGCGAAAAGCTCGCAAGTCTCCTGAACGCTGCCAAGTTGGCCAGTGACATCCCCTCCAAGCTCGAATCCCTGCGCCAACTGCGCCATGAACTTCCACCCGAAGACCCCGTCCTCCTCACTGAGTTCCTCCCCTCACTCTTCTTCTTCCACTCAGATCCCTTTGGCCCCGTTCGCAAATTTGTCACCGAGTACACCTTTTCCCTTTATCTTTTCTCCGTTCTCCGTCTGTGGATGCTTGGTGAGATTGGATTGAAGAACACCGAGTTCTTGTCTGACATTGTGCCTGTGCTAATTGAGGTTCTGAATGACGACACACCGGCAGTAGTTCGGCAAGCTCTTCTGTGTGGAATTGAGTTGTTTCGTGGCACACTTGAGAAAATTGTGGTTCAGGGTCTTTACTCTAGTGATTTAGATGGTGCACTTGAATCTGCATGGGAATGGATGCTTAAATTCAAAGAAAAAGCATACTCACTAGCTTTTCAATATGGAAGTGGTGGTGCTAAGCTGCTGGCACTGAAATTTGTTGAAGCAGTTGTTCATCTTTACACTCCTGATCCTAGTGGTTCCTCTGAGCCTACTTCTCATCAAGGAAAGCCTGTGGAATTTAATATATCATGGCTGAGGCGGGGTCATCCAGTACTCAATATTGGAGATTTGAAAATTGAAGCAAGCCGTAGTGTGGGTCTCTTGCTTGATCAACTCAGATTTTCAAATGTGAAGTCCCTTAGTAACTCAGTTATCATTGTGCTGATTAAAAGTCTTTCAGCTATTGCAAATGAAAGGCCTGCATTCTATGGTCGCATCTTGCCAGTTTTGCTTAGTTTGCAACCTTCCAGCTCTGTTGTTAATGGGTTCTGTGTATCAGCTGCGCATCTTGCTTTGAAGAATGCCTTTCTAACATGCTCGAAATGTACACATCCAAGTGCTGCTCCGTGGAGAGATCGTTTGGCAGGGGCCTTGAAGGAAATACAGTCAGAAGGAAAGGCAGATCGGGTGTTCCACCCAATCTCATCTAGCAATGGAAGCATTGAGAGAGAGAAGGATGATCAACCTGTAATCAAGGAAGAGGAACCTGCAATAAATTCTGATGATTCAGTACACAGTAATTTGGCAAGAAAACGATCTGGATCACAAATTGAAGGTGATTTAGCTGAAGATGTTCCTGGAAAACGTGTCAGGGCAACAATTGATGCTTTGGAAGAACCTAGCAAAGAGTTGGATGAACGTACCACTTCCAACTATCAGGATGAGACTCCTTCAAATGTACCGGCATCTTCAAACGGAGATACGGACAATGGGCCCGTAAGGCAGCTTGTTGCCACATTTGGTGCTTTGATTGCTCAAGGTGAAAAAGCTGTTGGGCATCTTGAGATTCTCATCTCAAGTATTTCTGCTGACTTGCTAGCTGAGGTGGTGATGGCAAATATGCAAAACTTACCTCCAAATTTCCCTAATACTGAAGGAAATGAACGGCTGCAAGACATTAGTATGATTGGTTCTGATGACAAGGCTAAATATCCACCATCATTTGTAGCTGCTGTTATGTCACTTTCTAGTACTTTTCCACCAATAGCTTCCCTTCTTGAGGCACAACAATCAGTTTCAAATGAGGTTGAGAAGTCACAAGGGGAGGAAGAAATTTCTGCAACTGCTGTCAATACTGGTGCTGTTCACTCTGGCATGAATCTTGTATCTGAAAATGTACCATCTCCTACTGATTTTCCAACTTCTGATGCTAGTATACCTGGAGTTGAGAATGGCTGTACAACTATGCCTCCTGACATCCATGATGTTGGAAACTCAGAGAGTGGAATTCCTGGCCTGGATTCTTTTGGTCGTAGTGATGCCTTGTCACAAACTTTTGATCCTTCTTTATTGGCTTCCACGGAAGTGGGCCTAGAAGATGGCAGCCAAGAGCAAGATACTAGTTTGGATCTGAGGTCACCCCTGAACTTAGCTCCATCAATATCAACAGATAGATCTGAGGATCTGAGCCCAAAAGCTTCTGTTAGAGATGTCAACAGCTTGGTGTCATCAACAGCTACTTCAGTTGTGTTGCCTTCCCGTTTAGTCTTGCCAAAGATGATTGCTCCTGTTGTTGAACTTGAAGATGAACAAACGGATCATTTGCAAAAATCATGTTTTATGCGTATTATTGATGCATATAAGCAAATAGCTGCAGCTGGAGGCTCCAAAGTCCGCTTTTCAATACTTGCTTATTTAGGAGTTGAGTTTCCCTTGGAATTAGACCCATGGAAACTATTACAGAAGCATATTTTAATTGATTACACTGGTCACGAGGGACATGAGTTGACATTACGTGTCCTCTACAGATTATTTGGTGAGGCTGAAGAGGAGCCTGACTTCTTTTCTTCCACTACTGCAGCTTCTGTATACGAAAAATTCCTCTTTACAGTGGCAGAAGCACTTAGAGATTCCTTTCCACCTTCAGATAAATCATTGAGTAAATTGCTTGGTGAATCTCCTTATTTACCAAAATCGGTTCTTAAAATTTTAGAAAACATGTGTTCTCCCGGAAATGGGGATAGAGGTGAAAAGGAATTACAGTCACTGAATGCGGATAGAGTTACTCAAGGTCTAAGTGCTGTATGGAGTTTGATTCTTCTTAGGCCTCCGATCCGAGATACTTGCTTACAAATTGCTCTACAGAGTGCAGTGCATCACTTGGAAGAAGTGCGTATGAAGGCTATACGTCTGGTGGCAAATAAGCTTTATCCTTTGTCATCCATTTCTCAGCAAATAGAAGATTTTGCAAAGGAAATGCTTTTCTCAGTTACAAGTAACGATGTTTCAGAATTAACAGATGCTGAAGGGTGCATTGCTGATTCACAAAAGGGACCTGATGTTGAAAAGGTTTCAAACGAACAATCATCATTGAGTGGCAGCACTAAAGATGTCTCAGATAATCGTCAATCATGCACATCTGAGAGTGTCTCACCAGATTCAGTTTCTGAGGCTCAGAGGTGCATGTCATTGTATTTTGCTTTGTGTACAAAGGCAGTGCATCGACAAATCCCAATACTAGTACGAACTATGGGCTCATCTTTAGATCTCCTTGAAACTATTTCGGATCCTCCGAACGGAAGCGAGAATCTTCTAATGCAGGTGTTGCATACACTTACAGATGGTACGATCCCTTCTAAGGATTTAATAAGCACTGTGAAAAGGTTGCATGATTCAAAACTCAAGGACGCAGAGGTTCTTATTCCGGTATTACCATTCCTATCAAATGAAGAGGTAATACCGATTTTTCCTCACATTGTGAATCTTCCTTTGGAGAAGTTCCAAACAGCACTTGGTCGCATATTACAGGGATCATCACAGTCTGGTCCGGTGCTTTCTCCGGCTGAAGTTTTAATTGCAATTCATGGAATTGATCCTGAAAGGGATGGAATTCCCTTGAAAAAGGTGACAGATGCATGCAATGCTTGTTTTGAGCAGCGACAAACTTTTACGCAGGAAGTTATTGCAAGAGTTTTGAATCAGTTGGTTGAGCAGATTCCTCCACCTTTACTATTCATGCGTACAGTGTTACAAGCAATTGGTGCTTTTCCAACACTGGTGGACTTTATCATGGGGATTCTTTCTCGCCTTGTGACAAAGCAGATATGGAAATATCCGAAGTTGTGGGTGGGATTCTTGAAGTGTGTGCAGCTGACAAAACCACAGTCATTTAGCGTTTTGCTTCAGCAGCTGCCTCCAGCACAATTGGAGAATGCATTAAATAGAATTTCAGCCTTGAAGGCACCATTGATTGCACATGCTAGCCAGCCAGATATACAATCCAAACTTCCGAGGGCTATGCTAGTTGTTCTTGGAATTGCATCCGATTCTCAAGTCTCATCAAGGTTGTTGTTTAGCTCTGTTGTGTGCATTTGTATCACTGATGAGACCATGCATAACATAAGCCTCATAGAGGGGCCTCAGGGCTACTGCACCTACAACCTCTATTTCAGCCGCGCCCAGCGTCCTCTGCTGAGGGGCACCTAG 4053 0.4338 MSMVGKTMSMAATSREKLASLLNAAKLASDIPSKLESLRQLRHELPPEDPVLLTEFLPSLFFFHSDPFGPVRKFVTEYTFSLYLFSVLRLWMLGEIGLKNTEFLSDIVPVLIEVLNDDTPAVVRQALLCGIELFRGTLEKIVVQGLYSSDLDGALESAWEWMLKFKEKAYSLAFQYGSGGAKLLALKFVEAVVHLYTPDPSGSSEPTSHQGKPVEFNISWLRRGHPVLNIGDLKIEASRSVGLLLDQLRFSNVKSLSNSVIIVLIKSLSAIANERPAFYGRILPVLLSLQPSSSVVNGFCVSAAHLALKNAFLTCSKCTHPSAAPWRDRLAGALKEIQSEGKADRVFHPISSSNGSIEREKDDQPVIKEEEPAINSDDSVHSNLARKRSGSQIEGDLAEDVPGKRVRATIDALEEPSKELDERTTSNYQDETPSNVPASSNGDTDNGPVRQLVATFGALIAQGEKAVGHLEILISSISADLLAEVVMANMQNLPPNFPNTEGNERLQDISMIGSDDKAKYPPSFVAAVMSLSSTFPPIASLLEAQQSVSNEVEKSQGEEEISATAVNTGAVHSGMNLVSENVPSPTDFPTSDASIPGVENGCTTMPPDIHDVGNSESGIPGLDSFGRSDALSQTFDPSLLASTEVGLEDGSQEQDTSLDLRSPLNLAPSISTDRSEDLSPKASVRDVNSLVSSTATSVVLPSRLVLPKMIAPVVELEDEQTDHLQKSCFMRIIDAYKQIAAAGGSKVRFSILAYLGVEFPLELDPWKLLQKHILIDYTGHEGHELTLRVLYRLFGEAEEEPDFFSSTTAASVYEKFLFTVAEALRDSFPPSDKSLSKLLGESPYLPKSVLKILENMCSPGNGDRGEKELQSLNADRVTQGLSAVWSLILLRPPIRDTCLQIALQSAVHHLEEVRMKAIRLVANKLYPLSSISQQIEDFAKEMLFSVTSNDVSELTDAEGCIADSQKGPDVEKVSNEQSSLSGSTKDVSDNRQSCTSESVSPDSVSEAQRCMSLYFALCTKAVHRQIPILVRTMGSSLDLLETISDPPNGSENLLMQVLHTLTDGTIPSKDLISTVKRLHDSKLKDAEVLIPVLPFLSNEEVIPIFPHIVNLPLEKFQTALGRILQGSSQSGPVLSPAEVLIAIHGIDPERDGIPLKKVTDACNACFEQRQTFTQEVIARVLNQLVEQIPPPLLFMRTVLQAIGAFPTLVDFIMGILSRLVTKQIWKYPKLWVGFLKCVQLTKPQSFSVLLQQLPPAQLENALNRISALKAPLIAHASQPDIQSKLPRAMLVVLGIASDSQVSSRLLFSSVVCICITDETMHNISLIEGPQGYCTYNLYFSRAQRPLLRGT 1350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian9g01057 1350 MobiDBLite consensus disorder prediction 392 426 - -
Vian9g01057 1350 Gene3D - 4 364 IPR011989 -
Vian9g01057 1350 MobiDBLite consensus disorder prediction 427 448 - -
Vian9g01057 1350 Pfam Symplekin tight junction protein C terminal 1085 1264 IPR022075 -
Vian9g01057 1350 PANTHER PHOSPHATIDYLINOSITOL 3-AND 4-KINASE FAMILY PROTEIN-RELATED 9 1304 - -
Vian9g01057 1350 MobiDBLite consensus disorder prediction 971 1001 - -
Vian9g01057 1350 MobiDBLite consensus disorder prediction 647 683 - -
Vian9g01057 1350 MobiDBLite consensus disorder prediction 345 448 - -
Vian9g01057 1350 Pfam Symplekin/PTA1 N-terminal 120 339 IPR032460 -
Vian9g01057 1350 MobiDBLite consensus disorder prediction 960 1001 - -
Vian9g01057 1350 MobiDBLite consensus disorder prediction 355 384 - -
Vian9g01057 1350 SUPERFAMILY ARM repeat 36 1219 IPR016024 -
Vian9g01057 1350 MobiDBLite consensus disorder prediction 647 677 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian9g01057 Vian-Chr9 21602259 21643709 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian9g01057 K06100 - gmx:100779360 2169.04