Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian9g00921 ATGGCTGCTCTCAAATTTGCAAGCGTGGTTGCGGTCATGTGCATGGTGCTAGTGACTGCACCCTTCACACAATCTATCACGTGCGGCCAAGTAGCCCGTGCCATATCCCCATGCCTCGGTTACCTTCGGGGTCCTGGTGGAGTGCCACCGCCGCAGTGCTGCGAAGGAGTGAGGAGCCTCAACACCGCTGCGAGAACCACCGCCGACCGCCGGACCGCGTGCAATTGCCTGAAATCCTCTGCTGGTTCCATTTCTCGGCTTAATTTCAATACCGCAGCTTCACTCCCAGGAAGATGTAGAGTGAGGATCCCCTACCAGATTAGCCGATCAGGTGATGGCTAA 342 0.5673 MAALKFASVVAVMCMVLVTAPFTQSITCGQVARAISPCLGYLRGPGGVPPPQCCEGVRSLNTAARTTADRRTACNCLKSSAGSISRLNFNTAASLPGRCRVRIPYQISRSGDG 113
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian9g00921 113 CDD nsLTP1 26 112 - -
Vian9g00921 113 PRINTS Plant phospholipid transfer protein signature 104 113 IPR000528 GO:0006869|GO:0008289
Vian9g00921 113 PRINTS Plant phospholipid transfer protein signature 69 84 IPR000528 GO:0006869|GO:0008289
Vian9g00921 113 PRINTS Plant phospholipid transfer protein signature 86 103 IPR000528 GO:0006869|GO:0008289
Vian9g00921 113 PRINTS Plant phospholipid transfer protein signature 27 43 IPR000528 GO:0006869|GO:0008289
Vian9g00921 113 PRINTS Plant phospholipid transfer protein signature 48 62 IPR000528 GO:0006869|GO:0008289
Vian9g00921 113 PANTHER NON-SPECIFIC LIPID-TRANSFER PROTEIN 2-RELATED 7 110 IPR000528 GO:0006869|GO:0008289
Vian9g00921 113 SUPERFAMILY Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin 26 110 IPR036312 -
Vian9g00921 113 Pfam Protease inhibitor/seed storage/LTP family 28 105 IPR016140 -
Vian9g00921 113 Gene3D - 25 113 IPR036312 -
Vian9g00921 113 SMART aai_6 28 109 IPR016140 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian9g00921 Vian-Chr9 17082208 17087844 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian9g00921 6 112 Acyl Lipid Metabolism Gene Families AT5G59320 47.664 6.11e-27 94.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian9g00921 - - gmx:100775184 152.14