Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian9g00897 ATGGGGGGCCATGTAGCAGCGGTGCACACTGCTACTAACGCTTTGCAAGCATTAGGCAGGGGTTTTGATGTGAATTTTGATACGAGGTTGCTCTATTGTAAAGGAATTTCAGGGTCTAGGGTAGTTGAAATTGATGAAGAACACCGTAGGGAGCTTTTGTTGTACGATGATGTCGCTGTTCCTGACGTTTCCAGGGACATTCGAAGTTCCCAGGAGACCATGGAGCGTCAGAGTTCTGGGGTGTGCACGTTTCCTGAGATGGTGGAATACTTTAATGGAAGGGCAAATATATCGGGGAACTTTCCTCTTGGGAGTTTTAATGCAGCATTTAGCTTCACCGGTTCAAAACATGTTGATGCTGCAGCCACAAAGACCTTGTCTACAGAAGGATTTTACATTCCTCTTGCAAAGGTTCAGCTTATAAAGTCCCACTTAACGTTGCAAGGAAATGTCAAAAAGGCTGTCCCATTCAATTGGGACCCACCGGCCTTGGCAAGTTTTATCGAAAATTTTGGGACTCATGTCATTAGATCTATAACTATTGGTGGTAAAGATGTTATTTATGTTAAACAACACCAAACTTCTTCTTTGTCAAAGTTGGAGATGAAAAACTATATTCAGGATATTGGAAATCAGAGGTTCTCTGACATCAATAGTCAAACAAGTGCAGGTCAAACAAAATCCAAGGATAAGGGTGTTGAGCCGTTTTCATTCAATAGTCAAGGGGTTTACCCCCAACCCACAACTGCAACATATCCTTCTGGGAAAGAAGATGTCACAGTCATTTTTAGAAGAAGAGGAGGAGATGATTTAGAACATAACCACAGGAAATGGCTATCAACTGTCAAGTCCTCCCCAGATATCATTGAGATGACTTTCTGTCCTATAACTGCTCTACTTGATGAAATACCTGCCAAGGAGCATTTGACTCGTGCCATTGGTCTTTATCTTGAGTTTAAACCTCCAATTGAAGAACTTAGATATTTCCTGGAGTTTCAGATTCCTCGTGTATGGGCTCCTTTACAAGACAGGATTCCTGGTCAACAAAGGAAGGAACCCGTGTGTCCATCTTTGCAATTCAGCATAATGGGCCAGAAACTTTACATCAGTCAAGAACAGATTACAGTGGGACGAAGGCCGGTAACGGGACTACGTCTCTGTCTAGAGGGAAGCAAGCAAAATCGGCTGAGCATTTTTGTTCAACACTTGGTATCCCTTCCAAAAATCCTTCATCCGTATTGGGACAGCCATGTTGCTATAGGTGCTCCCAAGTGGCAGGGACCCGAGGAGCAAGACAGCAGATGGTTTGAACCAGTTAAATGGAAGAACTTTTCTCATGTGAGCACTGCACCAATTGAGAACCCTGAAACCTTCATAGGAGACTTTTCTGGTGTCCACATAGTTACTGGAGCACAGCTTGGAGTGTGGGATTTTGGATCACGGAATGTGTTGTACATGAAGCTCTTATATTCAAGGTTACCCGGCTGCACCATTCGAAGATCGCTGTGGGACCATGCCGGAAACAGTTCGTCAAAAACAGTGAATGTTGGAAACACCTCCAACTCAGATAACTCAACCCTGGGAGAAAATGCCACAGGGAACAAGTTGGTGAAGTATGTTGACATGTCTGCGATGACCAAAGAGCCCCAAGACCCTCCTGGCCATTGGCTTGTCACTGGTGGAAAGCTTGGTGTGGAAAAAGGGAAAATTGTTTTGAGAGTGAAATATTCATTGCTTAATTACTGA 1746 0.4381 MGGHVAAVHTATNALQALGRGFDVNFDTRLLYCKGISGSRVVEIDEEHRRELLLYDDVAVPDVSRDIRSSQETMERQSSGVCTFPEMVEYFNGRANISGNFPLGSFNAAFSFTGSKHVDAAATKTLSTEGFYIPLAKVQLIKSHLTLQGNVKKAVPFNWDPPALASFIENFGTHVIRSITIGGKDVIYVKQHQTSSLSKLEMKNYIQDIGNQRFSDINSQTSAGQTKSKDKGVEPFSFNSQGVYPQPTTATYPSGKEDVTVIFRRRGGDDLEHNHRKWLSTVKSSPDIIEMTFCPITALLDEIPAKEHLTRAIGLYLEFKPPIEELRYFLEFQIPRVWAPLQDRIPGQQRKEPVCPSLQFSIMGQKLYISQEQITVGRRPVTGLRLCLEGSKQNRLSIFVQHLVSLPKILHPYWDSHVAIGAPKWQGPEEQDSRWFEPVKWKNFSHVSTAPIENPETFIGDFSGVHIVTGAQLGVWDFGSRNVLYMKLLYSRLPGCTIRRSLWDHAGNSSSKTVNVGNTSNSDNSTLGENATGNKLVKYVDMSAMTKEPQDPPGHWLVTGGKLGVEKGKIVLRVKYSLLNY 581
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian9g00897 581 ProSiteProfiles Membrane attack complex/perforin (MACPF) domain profile. 1 330 IPR020864 -
Vian9g00897 581 SMART MACPF_8 123 318 IPR020864 -
Vian9g00897 581 PANTHER MACPF DOMAIN-CONTAINING PROTEIN CAD1 6 581 IPR044663 GO:0006952|GO:0012501|GO:2000031
Vian9g00897 581 Pfam MAC/Perforin domain 104 316 IPR020864 -
Vian9g00897 581 MobiDBLite consensus disorder prediction 509 530 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian9g00897 Vian-Chr9 15858571 15863485 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian9g00897 - - gmx:100817248 1065.45