Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian9g00895 ATGGCTACCATGGCAGCTAGGGTTTCTTTGTTGGCCATTGTGTGCATGGTTCTTAGTGCAACAACCATTCCCAAGGCAGAAGCAGTGGTGACATGTGGGCAAGTTGTGAACAACCTGACCCCATGCATTTCCTATGTGATGTATGGTGGAAGCCCTGTTCCTGAGCCGTGCTGCAATGGGATCAAGAACCTCTATGGCCTGGCTCAGACCAAACCTGATCGCCAAGCTGTTTGCAACTGCATCAAGAATGCTGTTGGTAACAGTGGCTTCAACTACTCTCCTCGCAGTCTCAACCTTGCAGCTAGTCTTCCCAAGCAATGTGGTGTAAACATTCCTTACCAGATCAGCCCTAATACTGACTGTAACAGGATAACAGGAAGCCTTAAGTACCAACTGATGTCTTCTTCTGCTGCTACGTGTCGGTCAACCATCACTATAAATACAAATGATTGTGTGGTAGCTTGGCTCATAGCATCTTCAAATGATGGACCATCACGAATGACAAATATTGAAGGCAATGTTGGCATATTTCACAGCTCTCATAGGAGGCATTGA 555 0.4649 MATMAARVSLLAIVCMVLSATTIPKAEAVVTCGQVVNNLTPCISYVMYGGSPVPEPCCNGIKNLYGLAQTKPDRQAVCNCIKNAVGNSGFNYSPRSLNLAASLPKQCGVNIPYQISPNTDCNRITGSLKYQLMSSSAATCRSTITINTNDCVVAWLIASSNDGPSRMTNIEGNVGIFHSSHRRH 184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian9g00895 184 CDD nsLTP1 30 122 - -
Vian9g00895 184 Pfam Protease inhibitor/seed storage/LTP family 32 121 IPR016140 -
Vian9g00895 184 PANTHER NON-SPECIFIC LIPID-TRANSFER PROTEIN 2-RELATED 8 122 IPR000528 GO:0006869|GO:0008289
Vian9g00895 184 SMART aai_6 32 121 IPR016140 -
Vian9g00895 184 SUPERFAMILY Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin 30 124 IPR036312 -
Vian9g00895 184 Gene3D - 29 125 IPR036312 -
Vian9g00895 184 PRINTS Plant phospholipid transfer protein signature 112 123 IPR000528 GO:0006869|GO:0008289
Vian9g00895 184 PRINTS Plant phospholipid transfer protein signature 31 47 IPR000528 GO:0006869|GO:0008289
Vian9g00895 184 PRINTS Plant phospholipid transfer protein signature 52 66 IPR000528 GO:0006869|GO:0008289
Vian9g00895 184 PRINTS Plant phospholipid transfer protein signature 73 88 IPR000528 GO:0006869|GO:0008289
Vian9g00895 184 ProSitePatterns Plant lipid transfer proteins signature. 103 124 IPR000528 GO:0006869|GO:0008289
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian9g00895 Vian-Chr9 15787239 15795202 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian9g00895 26 125 Acyl Lipid Metabolism Gene Families AT3G08770 52.000 6.34e-31 107
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian9g00895 - - vun:114166121 211.846