Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian9g00875 ATGGCTCACCACCAACTCATCGACTCGCTCACCTCGCACATCTCCCTCTACCACTCCCAATCCCCAAACCCCAACCCTAACCCTAATCCTAACCCTCGATCCTCCATTCTCAAATGGTTCTCTTCTCTTTCAATTCACCAACGCCAGGCCTACCTAACCGTCGTCGACGGGAATTTCGTCCAGATCCTCCTCCAGATGCTGGCCAAACTCCGATCTCACGGCCACGGATCCTTCATTCTCCTCCCCGACCTCCCCTCGCCCAACAACCTCCCCACCCTCTGCTTCAAAAAGTCCCGCGGCCTTATTGCGCGCGTAGCTGAATCCGAAACAGCAGGGCGGGCGGTATTCGAGTCCGCACGGTTGTTCGAGTCGCGTGAGGGCGAGGAGGCTGCCAATTCATTGCCGCCCTCGGCGAGGCGGTTAGACGCGCTGACCCTTGCCGAGGGGTTTGTTGGGAATGTTGACCAGTTTGTGGAGGCCATGGACCGGATCTCCGGTGGTGGGTTCCTCCGGGGGGAGGAGGCCGAGCTTGGAGAGGATTGGGTCGAGCTGCATTGGCTCAAAGCAAAGGGGTATTATGGTATTGAAGCGTTTATTGCGAATAGGATGGAGGTTTCGATGAGATTGGCTTGGTTGAATTGCTGTGGAGGGAAGAAGAGAGGTGTGAAGTTGAAGGAGAAGATGAGTGCTGGGGGTGTTGGTGTGAATGTATTTTGGAGGAAGAAGGGGTGCGTTGATTGGTGGGCGAACTTGGATGCTGGGACCAGGAGGAAGATCTTCACCACCTTCATTATGAAAGCAGCAAAACCCTTGACTCGTGATGTTTTGGAAGTGTCAAGTAGTGCCTCTGATGATGAGATTTGGCTATACAGTGCGGGAGTGGATAAATTAATGCAACACAATCGTCCTATGTCAGTTCAACGGATCATCTCAGCTCTTCCTGCCGATATGGAATTTGGAACAGTTATTTCACCAGTCACTTTTTGTAAAAAACCAGCTGCTTTAGCCAGAGCCTTCAATTCTTTATTAGTACTTCATGATGTTAATATGATGGTAGCCTCAAATCTCAATAGTGAATATGACATAGGAAAGCTTTTCTTTAGTTCGTTGGGTTCTGTCTGTACGATATCTGATTGTATATTAAGAAAAATGCGAGGATTTTTTATGGTTATTTCACTTGACTGCACAAAACTTGAACTATTAGGAGAGACACTTGAACTGTCTTCACCAGGTAAACCTAAAGAAAAGCTTAGTTTTTCTAACCGGAAAAAGAAGGGACGAAATCGCAATACTAAAAGGCAAAATCCTGTCTCAAAGACATGCACAGATGGTATTTCACATGGAAATCCACTCAAGGACACTGATTGTAAAAGGGATAATAAAAAGAAGACTGATTTAGTGGGATCCAGGGAACTTCCTGCTGTTTGTATGGGGAAGGAGATTTCCATGGACAGCTCATCATCAACTGTAAAAATGGGTCATACTGAAGGATTGGATGTTGGCACAGTAAAAGTACGGACCACTTCAAAAAGAAGTAGAAAAGAGAAAAATAAAAGTAAAAACCTCGTCATTGATAGTGCAGGTGGAAATTCTCATAAATCAATTATGCATGCTGCCTCTACCACTGTTGTTTCTGAAGGTGAGGTGGCAATATGTGATAGATTTTTGAATAGTTCTACCATTCAGAATGTCAAAAATGACAATTCAATTGGTAATGACATCCTTACTTCAAATTCAAGCCTTTGTAGTAATCTTAGTGGGCTTACTAAGGAGAACAGTTCTACTGGAAAAGTTGAAGGAGAGACAGAAGATCTTGCTGAATCTGGGAATAGTTTAGGGCCTCAATGTTGTTTATTATCAGATGAAAGGAAAACTGTATGTTCTGGATTAGATACTTTTACAGGTGATTTAGATTGTAATGCTACTGTAACTCCTTCTGTACCTGCATTGAAACAAGGTGCATTGAAACAAGGTAGCTTCTTCAGCAAGGAAGATACCTGTCATCTGAACTCATTGCGTGTTGCCAAAGCTGATATAAAGTCTACTGCTCCTGACAAACCAATTAGAGAGGTTAATGTAAAGGAATTTGGGCGGTTGAATGAGCATGATAGATGTCTATTTGAGAGTAGAAATTCAGCTTTCTCAAAATGCAGTCCATATGAGTGGCCTGGGGTACCTTCTATTTATTTTCCATCTTTTAACTCACACCTCCCTCCTGCCACGGATAGATTACATCTTGATGTTGGGCGGCATTGGCACAATCACTTCTGCCATCCATTTGTTCCCACATTACAGCAGGCAAGAAATCCTTCTATTGAAGGTGGATGCAACCCAATCCTTTCTCGTCCTGTTCCTATGAGTTTTGACTGGCCACCAGTCTACCGAGGAGGCAGGACCCCATCACCAAACTATAATTATGACACTGGTTTTATATCTAGGAAGCAATGCACCTTTTCAAAAGGATTGGCTGTTCACAGCATTCAGGTCGATGCAACTGCTCCTGATGAAGAAAGAAAATATTCTGTGGATGCATGGGATTTACCTGACCTAACAAACACAATGGAGCTAGCAGATGAATTTGACAATCACTGTTTATCTGAGGAAGAGTATGAGGTTCATGCTGTTTCTGGTATAGATTATAATCAATATTTTGGTGGAGGCATAATGTACTGGAATCCTTCTGATTATCCGGGAAAAGGTTTCTCCAGGCCTCCCTCACTTAGCTCTGATGACAGTTTATGGGCTTTGCGTGAAGCTGACATGAATAGGACTGTGGATGATATGGTTGCTTGCACATCTTCGTATAGTACGAATGGTTTAACATCACCCACTGCTGCTGCATTTTGTTCTCCTTTTGATCCTGTAGGGACTGGGACCCAGACTGTTGGTTACATGATGTCAGGTAATGAAGTACCTGGAAAGATATTGCATTCTTCTTCAGTTACTGACCCAGCAGTGGATGAAGATAATTCTGGTTCTTTGGGTAGTGGTTTACCTGGAGAAGTTGATGGAAAGACAGGTGATTCACATCCATATCCCATTCTACGGCCAATAATTATTCCTAACTTGTCAAGGGAAAGGTTTGATCATAAAAGTCCCTGTGTTCCTCCCACCAGGCGGGAGCAGCCTCGCATAAAGCGGCCACCATCGCCTGTAGTGCTTTGTGTACCACGTGCACCACGTCCACCCCCTCCTTCTCCTGTGAGTGACTCCAGGAAACATAGGGGTTTTCCAACGGTTAGATCTGGTAGTTCCAGCCCAAGGCACTGGGGGATGAGAGGCTGGTATCATGATGGGAGTAATTTGGAGGAAGCATGTTTAAGAATGGATGGTGCTGAAGTTGTGTGGCCTTGGAGAAATAATAATCTTGCAGTTCGACCTTTGATTCAGCCTTTACCTGCTGCCTTGCTGCAGGACCGCCTGATTGCATTGTCACAGATAGCACGTGACCAGGAACATCCGGATGTCACCTTTCCCTTGCCACCTCCCGAGTTACAAAGCTGTTCTGCACAGAGTGCATCTTTATCTGTGATGCATGGCATTCTCCATGATGAGATTGACTCTTTCTGTAAACAGGTTGCTGCAGAAAATATGGCCAGGAGGCCTTACATTAATTGGGCTGTCAAGAGAGTGACCCGATTTCTGCAGGTTCTATGGCCTAGATCCCGCACTAACATATTTGGTTCCAATGCAACTGGTATGTCCCTTCCAACAAGTGATGTTGACCTTGTGGTTGGTCTACCTCCAGTGAGAAACCTGGAACCTATTAAAGAAGCTGGAATACTGGAAGGTCGTAATGGGATTAAAGAAACATGTCTTCAGCACGCAGCTAGGTATCTTGCCAATCAGGATTGGGTGAAAAATGATTCTCTGAAGACAGTGGAAAACACAGCTATTCCTATTATTATGCTTGTGGTGGAAGTACCTCAGGATGTTATTAACTCATCAGCTCCTATGATACAGTCATTAAAACAAAACCCACATCATAGCCCAGGTAACAATAGTAATTCTGATACCATCCAGTTAGAAGATTTGGCTTCGCCAAAAGGCTCCCAAATGAAATTTGATGCTTTGAAATCGAAATCAGTTCGTCTGGACATCAGCTTTAAGACCCCTTCACATACTGGACTCCAGACTACAGAAATGGTTAAAGAGTTGACAGAGCAATTTCCTGCTGCCACACCTCTTGCTCTGGTACTAAAACAATTTTTGTCTGATCGGAGCCTTGATCAATCCTACTCTGGTGGCTTAAGTTCCTACTGTTTGGTCTTACTAATTATACGATTTCTTCAGCATGAGCATCATCTAGGCCGTCCGATCAACCAAAATTATGGAAGCCTTCTGATGGATTTTCTCTACTTTTTTGGGAATGTGTTTGATCCTCGGCAAATGCGAATATCTGTTCAGGGAAGTGGACTTTATATAAAGAGAGAAAGAGGTTGTAGCATTGATCCAATTCACATAGATGATCCTCTTTTCCCAACTAATAATGTGGGGAGGAATTGCTTCCGAATTCATCAATGTATTAAGGCGTTTTCAGAAGCGTACTCTGTTCTTGAAAATGAACTCAAATTCCTAAGTAGTGATGGTGAGTCAAGTTCAAGGCCACCCTACAGACTGCTTCCAAAAATCATTCCAAGTCTTGATACATCAAGAGAACTTGAAGACTGA 4671 0.4406 MAHHQLIDSLTSHISLYHSQSPNPNPNPNPNPRSSILKWFSSLSIHQRQAYLTVVDGNFVQILLQMLAKLRSHGHGSFILLPDLPSPNNLPTLCFKKSRGLIARVAESETAGRAVFESARLFESREGEEAANSLPPSARRLDALTLAEGFVGNVDQFVEAMDRISGGGFLRGEEAELGEDWVELHWLKAKGYYGIEAFIANRMEVSMRLAWLNCCGGKKRGVKLKEKMSAGGVGVNVFWRKKGCVDWWANLDAGTRRKIFTTFIMKAAKPLTRDVLEVSSSASDDEIWLYSAGVDKLMQHNRPMSVQRIISALPADMEFGTVISPVTFCKKPAALARAFNSLLVLHDVNMMVASNLNSEYDIGKLFFSSLGSVCTISDCILRKMRGFFMVISLDCTKLELLGETLELSSPGKPKEKLSFSNRKKKGRNRNTKRQNPVSKTCTDGISHGNPLKDTDCKRDNKKKTDLVGSRELPAVCMGKEISMDSSSSTVKMGHTEGLDVGTVKVRTTSKRSRKEKNKSKNLVIDSAGGNSHKSIMHAASTTVVSEGEVAICDRFLNSSTIQNVKNDNSIGNDILTSNSSLCSNLSGLTKENSSTGKVEGETEDLAESGNSLGPQCCLLSDERKTVCSGLDTFTGDLDCNATVTPSVPALKQGALKQGSFFSKEDTCHLNSLRVAKADIKSTAPDKPIREVNVKEFGRLNEHDRCLFESRNSAFSKCSPYEWPGVPSIYFPSFNSHLPPATDRLHLDVGRHWHNHFCHPFVPTLQQARNPSIEGGCNPILSRPVPMSFDWPPVYRGGRTPSPNYNYDTGFISRKQCTFSKGLAVHSIQVDATAPDEERKYSVDAWDLPDLTNTMELADEFDNHCLSEEEYEVHAVSGIDYNQYFGGGIMYWNPSDYPGKGFSRPPSLSSDDSLWALREADMNRTVDDMVACTSSYSTNGLTSPTAAAFCSPFDPVGTGTQTVGYMMSGNEVPGKILHSSSVTDPAVDEDNSGSLGSGLPGEVDGKTGDSHPYPILRPIIIPNLSRERFDHKSPCVPPTRREQPRIKRPPSPVVLCVPRAPRPPPPSPVSDSRKHRGFPTVRSGSSSPRHWGMRGWYHDGSNLEEACLRMDGAEVVWPWRNNNLAVRPLIQPLPAALLQDRLIALSQIARDQEHPDVTFPLPPPELQSCSAQSASLSVMHGILHDEIDSFCKQVAAENMARRPYINWAVKRVTRFLQVLWPRSRTNIFGSNATGMSLPTSDVDLVVGLPPVRNLEPIKEAGILEGRNGIKETCLQHAARYLANQDWVKNDSLKTVENTAIPIIMLVVEVPQDVINSSAPMIQSLKQNPHHSPGNNSNSDTIQLEDLASPKGSQMKFDALKSKSVRLDISFKTPSHTGLQTTEMVKELTEQFPAATPLALVLKQFLSDRSLDQSYSGGLSSYCLVLLIIRFLQHEHHLGRPINQNYGSLLMDFLYFFGNVFDPRQMRISVQGSGLYIKRERGCSIDPIHIDDPLFPTNNVGRNCFRIHQCIKAFSEAYSVLENELKFLSSDGESSSRPPYRLLPKIIPSLDTSRELED 1556
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian9g00875 1556 PANTHER POLY(A) RNA POLYMERASE 465 1545 IPR045862 GO:0043631|GO:1990817
Vian9g00875 1556 SUPERFAMILY PAP/OAS1 substrate-binding domain 1391 1524 - -
Vian9g00875 1556 MobiDBLite consensus disorder prediction 588 607 - -
Vian9g00875 1556 Coils Coil 1509 1529 - -
Vian9g00875 1556 Gene3D - 1179 1194 - -
Vian9g00875 1556 Gene3D - 1351 1545 - -
Vian9g00875 1556 SUPERFAMILY Nucleotidyltransferase 1184 1386 IPR043519 -
Vian9g00875 1556 MobiDBLite consensus disorder prediction 507 528 - -
Vian9g00875 1556 MobiDBLite consensus disorder prediction 1029 1085 - -
Vian9g00875 1556 MobiDBLite consensus disorder prediction 433 447 - -
Vian9g00875 1556 MobiDBLite consensus disorder prediction 1029 1046 - -
Vian9g00875 1556 MobiDBLite consensus disorder prediction 1053 1069 - -
Vian9g00875 1556 Gene3D Beta Polymerase, domain 2 1195 1305 IPR043519 -
Vian9g00875 1556 Pfam Nucleotidyltransferase domain 1209 1251 IPR002934 GO:0016779
Vian9g00875 1556 MobiDBLite consensus disorder prediction 418 432 - -
Vian9g00875 1556 MobiDBLite consensus disorder prediction 408 460 - -
Vian9g00875 1556 MobiDBLite consensus disorder prediction 978 1011 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian9g00875 - - ccaj:109818618 2165.96