Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian9g00857 ATGGCCCAGGTGAGCAGAGTGCACAATCTTGCTCAAAGCACTCAAATTTTCGGTCATTCTTCCAATCCCAACAAACCCAAATCAGTGAATTCAGTTTCGTTGAGGCCACGCCTTTGGGGGTCCTCAAAATCTCGGAGTCTCATTCATAAAAATGGAAGCGTTGTGGGAAATTGCAATGTGGGTATGAGAAATTCCGGCGTGTTTAAGGTTTCTGCCTCTGTCGCCGCCACGGAGAAGCCGTCGACGGCGCCGGAGATTGTGTTGGAACCCATTAAGGAAATCTCGGGTGCCATCACATTGCCAGGGTCTAAGTCTCTTTCCAATCGAATTCTGCTTCTGGCTGCTCTATCTGAGGGAACAACTGTTGTAGACAACTTGTTGTATAGCGAGGATATTCATTACATGCTTGGTGCATTAAGGACCCTCGGACTACGTGTGGAAGATGACAAAACAACCAAGCAAGCAATTGTGGAAGGCTGTGGGGGATTGTTTCCCACTGCTGGAGAATCTAAAGATAAAATCAATTTATTCCTTGGTAATGCTGGTACTGCAATGCGTCCTTTGACAGCAGCTGTTGTTGCAGCTGGTGGAAATGCAAGCTATGTACTTGATGGAGTGCCTAGAATGAGAGAGAGGCCAATTGGTGATTTGGTTGCTGGTCTGAAGCAGCTTGGTGCAGATGTTGATTGCGTCCTTGGCACAAACTGTCCGCCTGTTCATGTGAATGGGAAGGGGGGACTTCCTGGTGGTAAGGTGAAACTGTCTGGATCAGTTAGCAGTCAATACTTGACTGCTTTGCTTATGGCAGCTCCTTTAGCTCTTGGAAACGTGGAAATTGAGATTGTTGATAAACTGATTTCTGTTCCATATGTTGATATGACTCTTAAGTTGATGGAGCGGTTTGGAGTTTATGTCGAACACAGTGGTAATTGGGACAGGTTCTTGGTCCATGGAGGTCAAAAGTACAAGTCTCCGGGCAATGCTTTTGTTGAAGGTGATGCTTCAAGTGCCAGTTACTTCCTAGCTGGTGCAGCAATCACTGGGGGGACTATGACTGTTGAGGGCTGTGGCACAAGCAGTTTACAGGGAGATGTAAAATTTGCTGAAGTTCTTGAAAAGATGGGAGCTCAAGTTACATGGACAGAGAACAGTGTCACTGTTACTGGACCACCACGAGATTCTTCTGGTCGAAAAGTCTTGCAAGGCATTGATGTCAATATGAACAAGATGCCAGATGTTGCCATGACACTTGCTGTTGTTGCACTATTTGCTAATGGTCCCACCACTATAAGAGATGTTGTACAACCTGGGGCACCTGCTCCTTGGGTTGGTCCAGTTCTTACTCATGACAGTCTTTTGCATCTAACTGTGGCGAGTTGGCGAGTTAAAGAGACAGAGAGAATGATAGCAATATGCACTGAACTCAGAAAGCTAGGAGCAACGGTTGAAGAAGGTCCTGATTACTGTGTGATTACTCCTCCCGAGAAATTGAATGTAACATCTATAGACACATATGATGATCATAGAATGGCAATGGCATTCTCTCTTGCTGCTTGTGGAGACGTTCCAGTAACCATCAAGGATCCTGGTTGCACCAGGAAGACATTTCCTGACTACTTTGAAGTCCTTGAGAGGTTCACCAAGCACTAG 1650 0.4594 MAQVSRVHNLAQSTQIFGHSSNPNKPKSVNSVSLRPRLWGSSKSRSLIHKNGSVVGNCNVGMRNSGVFKVSASVAATEKPSTAPEIVLEPIKEISGAITLPGSKSLSNRILLLAALSEGTTVVDNLLYSEDIHYMLGALRTLGLRVEDDKTTKQAIVEGCGGLFPTAGESKDKINLFLGNAGTAMRPLTAAVVAAGGNASYVLDGVPRMRERPIGDLVAGLKQLGADVDCVLGTNCPPVHVNGKGGLPGGKVKLSGSVSSQYLTALLMAAPLALGNVEIEIVDKLISVPYVDMTLKLMERFGVYVEHSGNWDRFLVHGGQKYKSPGNAFVEGDASSASYFLAGAAITGGTMTVEGCGTSSLQGDVKFAEVLEKMGAQVTWTENSVTVTGPPRDSSGRKVLQGIDVNMNKMPDVAMTLAVVALFANGPTTIRDVVQPGAPAPWVGPVLTHDSLLHLTVASWRVKETERMIAICTELRKLGATVEEGPDYCVITPPEKLNVTSIDTYDDHRMAMAFSLAACGDVPVTIKDPGCTRKTFPDYFEVLERFTKH 549
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian9g00857 549 Hamap 3-phosphoshikimate 1-carboxyvinyltransferase [aroA]. 92 549 IPR006264 GO:0003866|GO:0009073
Vian9g00857 549 Gene3D Enolpyruvate transferase domain 443 546 IPR036968 GO:0016765
Vian9g00857 549 PANTHER AROM/DEHYDROQUINATE SYNTHASE 77 545 - -
Vian9g00857 549 Gene3D Enolpyruvate transferase domain 102 314 IPR036968 GO:0016765
Vian9g00857 549 ProSitePatterns EPSP synthase signature 1. 176 190 IPR023193 -
Vian9g00857 549 FunFam 3-phosphoshikimate 1-carboxyvinyltransferase 102 314 - -
Vian9g00857 549 NCBIfam 3-phosphoshikimate 1-carboxyvinyltransferase 96 433 IPR006264 GO:0003866|GO:0009073
Vian9g00857 549 SUPERFAMILY EPT/RTPC-like 86 545 IPR013792 GO:0003824
Vian9g00857 549 Pfam EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) 89 433 IPR001986 GO:0016765
Vian9g00857 549 Pfam EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) 457 543 IPR001986 GO:0016765
Vian9g00857 549 CDD EPSP_synthase 94 546 IPR006264 GO:0003866|GO:0009073
Vian9g00857 549 MobiDBLite consensus disorder prediction 13 35 - -
Vian9g00857 549 Gene3D Enolpyruvate transferase domain 321 436 IPR036968 GO:0016765
Vian9g00857 549 ProSitePatterns EPSP synthase signature 2. 461 479 IPR023193 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian9g00857 K00800 - gmx:100789268 929.858
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian9g00857 9 13760788 13773278 Vian9g00857 9 13760788 13773278 ECH