Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian9g00777 ATGGAAGACAAGCACAACCTCAAAGATAATAAGGAGCTTCAACCACTCCTAGTGTTTGGTCCTCCAATAATCTTCCCAACTTTTGAAGCACAAAACTCTCACAACTACCGTTTCCTCAAAGCTTTCTCCTCACAAGACCCTCTCCACCAATTCCTCACTGAGCAAAAGGTTGACCCGTCATCAATTCAAGCCATATTGTGCAACCCTGCACAGAAGGTCTCAGCAGATGTCATCCGGTTCCTTCCATCACTCCGCATCATTGTGACCACCAGCGCTGGAACCGATCACATAGACTTGGTTGAATGCAGCCGTCATAGTATTCAGGTTGCCTGTGCTGCTGGAGATCATGCAGGGGATGTTGCTGATATGGCTGTGGGGTTGTTGCTTGATGTACTGTGCAAAATTTCTGCCGCTGATCGACATGTTCGGAAACGGGGTCCTTCTATGCCGTTGAATGTTTTTTTTGGTTCCAAGCTAAAAGGAAAGCGAGTAGGGATTGTTGGATTGGGAAAAATTGGCACAGCAGTTGCCGAAAGGCTTGAGGCCTTCGGTTGCAGTATGATGTACAATTCAAGAAAGGAGAAGGCATTTATTTCATACCCCTTTTATTCTAATGTTGTTGAGCTTGCTGGTGATAGTGATGTCCTTGTGCTTTGTTGCCCATTAAATGAAGAAACAAGGCACATAGTGAATAGGGAAGTGATGTTGGCGTTGGGGAAAGATGGATGTATTGTGAATGTTGGGCGTGGAGGTCTGATTGATGAAAAGGAATTGGTGCAGTGTTTGATGGAAGGGGAGATAGGGGGTGCTGGCTTGGATGTGTTTGAGAATGAGCCTATTGTTCCCACTGATCTCTTTTCTTTGGATAATGTGGTCCTCTCCCCACATGCTTCTTCATTAACTTCAGATAGTTTGGATGAATCATATAAACTTTCAGCAGAAGCTCTGCAAGTTTTCTTTTCAAGTAACTGA 972 0.4465 MEDKHNLKDNKELQPLLVFGPPIIFPTFEAQNSHNYRFLKAFSSQDPLHQFLTEQKVDPSSIQAILCNPAQKVSADVIRFLPSLRIIVTTSAGTDHIDLVECSRHSIQVACAAGDHAGDVADMAVGLLLDVLCKISAADRHVRKRGPSMPLNVFFGSKLKGKRVGIVGLGKIGTAVAERLEAFGCSMMYNSRKEKAFISYPFYSNVVELAGDSDVLVLCCPLNEETRHIVNREVMLALGKDGCIVNVGRGGLIDEKELVQCLMEGEIGGAGLDVFENEPIVPTDLFSLDNVVLSPHASSLTSDSLDESYKLSAEALQVFFSSN 323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian9g00777 323 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 119 299 IPR036291 -
Vian9g00777 323 CDD HPPR 14 321 - -
Vian9g00777 323 SUPERFAMILY Formate/glycerate dehydrogenase catalytic domain-like 61 145 - -
Vian9g00777 323 PANTHER 2-HYDROXYACID DEHYDROGENASE-RELATED 24 321 - -
Vian9g00777 323 Pfam D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 60 124 IPR006139 GO:0016616|GO:0051287
Vian9g00777 323 Gene3D - 117 301 - -
Vian9g00777 323 Pfam D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 125 297 IPR006140 GO:0051287
Vian9g00777 323 FunFam Putative 2-hydroxyacid dehydrogenase 117 301 - -
Vian9g00777 323 Gene3D - 35 321 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian9g00777 Vian-Chr9 10690331 10691810 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian9g00777 K15919 - gmx:100812243 500.745
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian9g00777 9 10690331 10691810 Vian9g00777 9 10690331 10691810 ECH