Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian9g00775 ATGGAAAACATTTTAAAGAAATGGGGCATTTACCAATTTCCAGGAGCTCAACCATCAATGGCAATGGAAGACAAGCACAACCTCAAAGATGATAGGGAGTTTCAACCACTCCTAGTGTTTGGTCCTCCAACAATCTTCCCAATTTTTGAAGCTCAAAACTCTCACAACTACCGTTTCCTCAAAGCTTACTCCTCACAAGTTCCTCTCCACCAATTCCTCACTGAGCAAAAGGTTGACCCGTCATCCATTCAAGCCATATTATGCAACCCTGTACAGAAGGTCTCAGCAGATGCCATCCGGCTCCTCCCATCACTCCGCATCATTGTGACCACCAGCGCTGGAACCGACCACATAGACTTGGTTGAATGCAGCCGTCATAGTATTCAGGTTGCCTCTACTGCTGGAGATCATGCCGGGGATGTTGCTGATATGGCTGTTGGGTTGTTGCTTGATGTAGTATGCAAAATTTCTGCTGCTGATCGACATGTTCGGAAACGGGGTCCGTCTATGCCCTTGAATCTTTCTTTTGGTTTTAAGCTAAAAGGAAAGCGAGTAGGGATTGTTGGATTGGGAAAAATTGGCACAGCAGTTGCCGAAAGGCTTGAGGCCTTCGGTTGCAGTATGATGTACAATTCAAGAAAGGAGAAGGCATTTATTTCATACCCCTTTTATTCTAATGTTGTTGAGCTTGCTGGTGATAGTGATGTTCTTGTGCTTTGTTGCTCATTAAATGAAGAAACAAGGCACATAGTGAATAGGGAAGTGATGTTGGCGTTGGGGAAAGATGGATTTATTGTGAATGTTGGGCGTGGAGGTCTGATTGATGAAAAGGAATTGATGCAGTGTTTGATGGAAGGGGAGATAGGGGGTGCTGGCTTGGATGTGTTTGAGAATGAGCCTATTGTTCCCACTGATCTCTTTTCTTTGGATAATGTGGTCCTCTCCCCACATAATTCTTCATTTACTTCAGATCTTTTCCATGAATCATGTAAACTTGCAGCAGAAACTCTGCAAGTTTTCTTTTCAAGTAGCAGCTAG 1038 0.4393 MENILKKWGIYQFPGAQPSMAMEDKHNLKDDREFQPLLVFGPPTIFPIFEAQNSHNYRFLKAYSSQVPLHQFLTEQKVDPSSIQAILCNPVQKVSADAIRLLPSLRIIVTTSAGTDHIDLVECSRHSIQVASTAGDHAGDVADMAVGLLLDVVCKISAADRHVRKRGPSMPLNLSFGFKLKGKRVGIVGLGKIGTAVAERLEAFGCSMMYNSRKEKAFISYPFYSNVVELAGDSDVLVLCCSLNEETRHIVNREVMLALGKDGFIVNVGRGGLIDEKELMQCLMEGEIGGAGLDVFENEPIVPTDLFSLDNVVLSPHNSSFTSDLFHESCKLAAETLQVFFSSSS 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian9g00775 345 Pfam D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 146 318 IPR006140 GO:0051287
Vian9g00775 345 Pfam D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 58 145 IPR006139 GO:0016616|GO:0051287
Vian9g00775 345 FunFam Putative 2-hydroxyacid dehydrogenase 138 322 - -
Vian9g00775 345 PANTHER 2-HYDROXYACID DEHYDROGENASE-RELATED 42 342 - -
Vian9g00775 345 SUPERFAMILY Formate/glycerate dehydrogenase catalytic domain-like 82 165 - -
Vian9g00775 345 Gene3D - 70 342 - -
Vian9g00775 345 CDD HPPR 35 342 - -
Vian9g00775 345 Gene3D - 138 322 - -
Vian9g00775 345 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 140 320 IPR036291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian9g00775 Vian-Chr9 10665410 10667120 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian9g00775 K15919 - gmx:100812243 493.812
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian9g00775 9 10665410 10667120 Vian9g00775 9 10665410 10667120 ECH