Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian9g00774 ATGTTGATCCCTCATCCATCAATGCTAGTTGCACCACAAAGCAACGACATTGAAGTTCAACAAGTGAACTTGGATGCACCTCTGCAAAACCACTCCAACATACCCTCTGAGTTTGTGTGGCCTGACGATGAGAAACCGTGTCTTCAGCCACCAGCACTCAAGATTCCACCCATTGACATGAAGGCCTTTCTCTCCAGAGATCCAGAGGCTGTGGCAAACATTTGTGCAGAAGTCAGTGAGGCATGCAAGAAGCATGGCTTCTTTCTTGTTGTCAACCATGGAGTTGACAAGAAGCTCATAGAGAAAGCTCACAAGCTCATAGACGCTTTCTTCTGCATGGAGCTTCCAGAGAAGCAGAGGCTTCAGAGAAAGTTAGGAGAACACTGTGGCTTTGCTAATAGCTTTATAGGAAGGTTCTCCTCCAAACTTCCTTGGAAGGAAACACTTTCTTTCCATTACTCTAATGATAAATCCACCAGAACTGTTGAGGACTATTTTCTATCTTCCATGGGAGAAGATTTCAGAGAGTTTGGGAGTGTATTTCAAGAGTACTGTGAAGTGATGAGCAATCTGTCTCTTGAGATCACGGAGCTTCTGGGAATGAGCCTCGGAGTAAGCAGAGAATGTTTCAGAGATTTCTTCGAAGACAACGAGTCTGTTATGAGGTTGAACTACTACCCATCATGCCAAAAACCTGAGGTAGCTTTAGGAACTGGACCTCATTGTGACCCCACTTCCCTAACAGTTCTCCACCAAGATCAAGTCGAGGGCCTCCAAGTCTTTGTCGACGGAAGATGGTACTCTGTCGCCCCAAAAGAAGATGCGTTCGTTGTCAACATTGGCGACACATTTATGGCTCTTACCAATGGGATATTCAAGAGTTGCTTGCATAGAGCTATTGTGAACAACCAGATTGTGAGAAAATCTCTTGCTTTCTTCCTTTGTCCACATAAAGACAAAGTGGTGACTCCTCCAAAGGAACTGATCACTAACGAGAATCCAAAGAAATATCCAGATTTCACATGGCCAACTCTTCTTGAATTCACACAGTTACATTACAGGTCTGACGTGGAAACACTTGATGCCTTCTCGAGATGGTTACTAGAGAAAAACAAGTGA 1119 0.4424 MLIPHPSMLVAPQSNDIEVQQVNLDAPLQNHSNIPSEFVWPDDEKPCLQPPALKIPPIDMKAFLSRDPEAVANICAEVSEACKKHGFFLVVNHGVDKKLIEKAHKLIDAFFCMELPEKQRLQRKLGEHCGFANSFIGRFSSKLPWKETLSFHYSNDKSTRTVEDYFLSSMGEDFREFGSVFQEYCEVMSNLSLEITELLGMSLGVSRECFRDFFEDNESVMRLNYYPSCQKPEVALGTGPHCDPTSLTVLHQDQVEGLQVFVDGRWYSVAPKEDAFVVNIGDTFMALTNGIFKSCLHRAIVNNQIVRKSLAFFLCPHKDKVVTPPKELITNENPKKYPDFTWPTLLEFTQLHYRSDVETLDAFSRWLLEKNK 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian9g00774 372 Gene3D - 19 352 IPR027443 -
Vian9g00774 372 Pfam non-haem dioxygenase in morphine synthesis N-terminal 55 158 IPR026992 -
Vian9g00774 372 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 216 316 IPR005123 -
Vian9g00774 372 Pfam 2OG-Fe(II) oxygenase superfamily 218 316 IPR044861 -
Vian9g00774 372 PRINTS Isopenicillin N synthase signature 276 302 - -
Vian9g00774 372 PRINTS Isopenicillin N synthase signature 241 262 - -
Vian9g00774 372 PRINTS Isopenicillin N synthase signature 78 95 - -
Vian9g00774 372 SUPERFAMILY Clavaminate synthase-like 28 355 - -
Vian9g00774 372 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 55 345 - -
Vian9g00774 372 FunFam Gibberellin 20 oxidase 2 25 354 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian9g00774 Vian-Chr9 10657947 10659611 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian9g00774 32 366 Glycosyltransferase AT5G59530 29.651 2.76e-34 128
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian9g00774 K05282 - gmx:100775693 636.721
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian9g00774 9 10657947 10659611 Vian9g00774 9 10657947 10659611 ECH