Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian9g00765 ATGAGTATTATTATCTTGTGCCTTTTTTTGCTACCCTTTTGCCTCTTAAACTTGAGCACCAACATCATTTTTGTAACTGGTCATTGTCTTGGCCATCAACAATCTTTGCTGCTGCATTTGAGGAACAACCTTGTATTCAATCCGACCAAGTCCAAAAAACTGATTCACTGGAACCAAAGTGATGATTGTTGTGAATGGACTGGAGTGACATGCAGCAAAGGCCATGTTATAGCTCTTGACTTGAGCCAAGAATCCATCTCTAGAGGTATTGATCATTTAAGCAGTCTCTTCGAGTTGCAATATTTGCAGAGTTTGAATTTGGCCCACAATGATTTTCATTCTGAGATTCCTCCACAGTTCAAAAAACTGAAGAATTTGAGGCATTTGAATTTGTCAAATGCTGGATTTGAGGGGCAAATTCCAATTGAGATTTCTTACTTGATCAAGTTAGAAACTCTTGATTTGTCTAGCACAGTTACTTCAAAACATGGTTTAAAACTTGAGACACCAAATATTGCAATGCTTGTGCAGAACTTCACAGAAATCAAAGAGTTACATCTGGATGGCATTGCAATATCAGCCAAAGGAGAGGTGTGGAGCCATGTTTTATCTTCACTCACTAGCATGCAAGTGTTAAGTATGTCATCTTGTAATCTCTCTGGTCCTTTGGATTCTTCATTAGTAAAACTGCAATCTCTCTTAATTCTTCAGTTGAACCAGAATAATTTAGCAGGTCCAGTTCCAGAGTCTTTGGGAAGTTTGTTCAATTTGACCACCTTGCAACTCAGTGATTGTGGTTTGAATGGAGTCTTTCCAAAAACTATCTTCCAAATACCATCATTGCAGGTGCTTGATGTGTCTGATAATCCAGGTCTTCATGGCTCTCTACCAAACTTTCCAAGTCAAGGCTCTCTCTACAACTTCAACCTTAGCCACACAAATTTTTCTGGGCCTCTGCCAGAATCTATTGACAATTTGAAGCAATTGTCTAAATTAGACCTATCAAATTGCCAGTTCAGAGGAACACTTCCTTATTCAATGTCAAATCTCACCCAACTTGTTCATCTAGACTTGTCATACAATAACTTTACTGGTCCTATTCCATCTTTTAATAGATCCAAGGCCCTGATAGTTTTATCCCTTAATCATAATCATTTTATGGGTACAGTTCCATCTACTCATTTTAAAGGCCTCACAAATCTCATGAGGATTGATTTAGGAGATAACTCCTTTGATGGAAGAGTCCCTTCATCTTTGTTAAGACTTCAATCTCTTCAACATCTCATGCTTTATTACAACAAATTTGATGGTGTGTTGGATGAATTTCCTAATGCATCTTTGTCATCATTAGAGATGCTTGATTTGAGTGGCAACAACTTTGAAGGGCCTATTCCTATGTCTGTCTTTCAACTCAAAAGACTTCGTTTGCTTTATCTTTCCAAAAATAAGTTCAATGGCACTCTACAACTTGGTGTGATTGGGAGGCTGCAGAATTTGTCTTCACTTGATCTTGCACACAATAACTTGTCAGTTGATGCAAGAATCGATGATGCATCATCCTTTCCCAGTTTGAAAACTCTATGGTTGGGTTCATGCAATTTGAGATCATTCCCTGAATTTTTGAGAAACAAATCTTCACTGCTCTTCCTAGACTTGTCTAGCAATCACATTGAAGGAACAATACCAAACTGGATTTGGAAATTTGACAGTATGGTTATCTTGAATGTTTCTTACAACCTTTTGACAGATTTTGAAGGGCCTTTCCAAAACCTTACTTCAAATTTGCTCAAACTTGACCTTCACTCAAACAGTCTCCAAGGGCCTGCTCCTACTTATCTGAAAAATGCCATTTATTTGGATTACTCAAGCAATAACTTCAGCTCTATTAATTTTGTCGACATTGCTAGTAACATTCCTTTCTTGTACTTTCTCTCCCTTTCAAACAACAGTTTTCATGGAAAAATTCATGAATCCTTTTGTAACATTTCAGATCTTCGAGCACTTGATCTTTCTCATAACAGATTCAACGGCCTCATTCCAATGTGTTTGACAGGAAGGAAAAAGTCTTCACCACCATCATCAGAAACAACTGATTCTGATACAAAGGGTTCCATTGAATGGAATATCTTGAGTGTGGAATTGGGGTTTACTTTTGGCTTTGGAATTTACATATTCCCACTCATTTTCTTCAAGAGATGGAGAATGTGGTATTCCAAACACGTCGAAAACATCCTCTGCAAGATTGTTCCTCAGCTTGATTTTGTTTATGTGCATCGTTTTGGTACTGTTGCTGAATAA 2298 0.3764 MSIIILCLFLLPFCLLNLSTNIIFVTGHCLGHQQSLLLHLRNNLVFNPTKSKKLIHWNQSDDCCEWTGVTCSKGHVIALDLSQESISRGIDHLSSLFELQYLQSLNLAHNDFHSEIPPQFKKLKNLRHLNLSNAGFEGQIPIEISYLIKLETLDLSSTVTSKHGLKLETPNIAMLVQNFTEIKELHLDGIAISAKGEVWSHVLSSLTSMQVLSMSSCNLSGPLDSSLVKLQSLLILQLNQNNLAGPVPESLGSLFNLTTLQLSDCGLNGVFPKTIFQIPSLQVLDVSDNPGLHGSLPNFPSQGSLYNFNLSHTNFSGPLPESIDNLKQLSKLDLSNCQFRGTLPYSMSNLTQLVHLDLSYNNFTGPIPSFNRSKALIVLSLNHNHFMGTVPSTHFKGLTNLMRIDLGDNSFDGRVPSSLLRLQSLQHLMLYYNKFDGVLDEFPNASLSSLEMLDLSGNNFEGPIPMSVFQLKRLRLLYLSKNKFNGTLQLGVIGRLQNLSSLDLAHNNLSVDARIDDASSFPSLKTLWLGSCNLRSFPEFLRNKSSLLFLDLSSNHIEGTIPNWIWKFDSMVILNVSYNLLTDFEGPFQNLTSNLLKLDLHSNSLQGPAPTYLKNAIYLDYSSNNFSSINFVDIASNIPFLYFLSLSNNSFHGKIHESFCNISDLRALDLSHNRFNGLIPMCLTGRKKSSPPSSETTDSDTKGSIEWNILSVELGFTFGFGIYIFPLIFFKRWRMWYSKHVENILCKIVPQLDFVYVHRFGTVAE 765
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian9g00765 765 Gene3D Ribonuclease Inhibitor 113 163 IPR032675 -
Vian9g00765 765 Gene3D Ribonuclease Inhibitor 27 112 IPR032675 -
Vian9g00765 765 SMART LRR_typ_2 447 471 IPR003591 -
Vian9g00765 765 SMART LRR_typ_2 521 544 IPR003591 -
Vian9g00765 765 SMART LRR_typ_2 662 685 IPR003591 -
Vian9g00765 765 SMART LRR_typ_2 496 518 IPR003591 -
Vian9g00765 765 SMART LRR_typ_2 230 254 IPR003591 -
Vian9g00765 765 SMART LRR_typ_2 422 444 IPR003591 -
Vian9g00765 765 SMART LRR_typ_2 350 372 IPR003591 -
Vian9g00765 765 SMART LRR_typ_2 123 147 IPR003591 -
Vian9g00765 765 SMART LRR_typ_2 99 122 IPR003591 -
Vian9g00765 765 Gene3D Ribonuclease Inhibitor 173 301 IPR032675 -
Vian9g00765 765 Pfam Leucine rich repeat 377 434 IPR001611 GO:0005515
Vian9g00765 765 Pfam Leucine rich repeat N-terminal domain 33 72 IPR013210 -
Vian9g00765 765 Gene3D Ribonuclease Inhibitor 372 690 IPR032675 -
Vian9g00765 765 PANTHER LEUCINE-RICH REPEAT SERINE/THREONINE-PROTEIN KINASE 1 302 685 - -
Vian9g00765 765 Gene3D Ribonuclease Inhibitor 302 371 IPR032675 -
Vian9g00765 765 SUPERFAMILY RNI-like 104 503 - -
Vian9g00765 765 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 369 611 - -
Vian9g00765 765 SUPERFAMILY L domain-like 441 680 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian9g00765 Vian-Chr9 10228067 10231461 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian9g00765 99 687 Receptor kinase-like Gene Family AT1G47890 26.145 4.03e-30 125
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian9g00765 - - gmx:100805833 1139.41