Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Vian9g00727 | ATGGCCACCCAATCAACTACTATCCAGCTCACCCTTCTCTCAGCGGAAGGTCTTCACGTCAGGGGAAAACCGGCCAACACCAACGTCTTCGCGGTGGTTCGCGCTGACTCCATTGCCAGCCACACGACGGCGACGGCCACGGAGAGCAACGGGTCGCTGTCCTGGGAGGAGACGTTTTCGTTGAAGGTGGGGCCTTACGCGAGGTGCCTGACGATTGAAGTGAAGTGCAGGACGGGAGCGGGAGAGAGAGACGTCGGCGTGGCAAGAATCGCGCTTTCGGATTTTCTTGGAAGGTCAGTGCCCGGCAATAGATTGCAGTTGTGCTACAGGTTGAGGGACTGGGATGGGAGAGAAAACGGGACCGTTAATTTCTCCGTCAGAGTGGTGGCGCCGCCACAGCCGCACGCCGCCGCGGACCAGAATGGTTGTGAGTCGTCGTTGGGTGGAGTTGTTACCGGCATTCCCGTTTGGTTGGAGGAGTCAGAGACAAGTAACAGGAGCAATATTTGA | 510 | 0.5784 | MATQSTTIQLTLLSAEGLHVRGKPANTNVFAVVRADSIASHTTATATESNGSLSWEETFSLKVGPYARCLTIEVKCRTGAGERDVGVARIALSDFLGRSVPGNRLQLCYRLRDWDGRENGTVNFSVRVVAPPQPHAAADQNGCESSLGGVVTGIPVWLEESETSNRSNI | 169 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Vian9g00727 | 169 | Gene3D | C2 domain | 5 | 129 | IPR035892 | - | |
| Vian9g00727 | 169 | Pfam | C2 domain | 8 | 99 | IPR000008 | - | |
| Vian9g00727 | 169 | ProSiteProfiles | C2 domain profile. | 1 | 109 | IPR000008 | - | |
| Vian9g00727 | 169 | SUPERFAMILY | C2 domain (Calcium/lipid-binding domain, CaLB) | 8 | 133 | IPR035892 | - | |
| Vian9g00727 | 169 | CDD | C2_SRC2_like | 7 | 124 | IPR044750 | GO:0006952 | |
| Vian9g00727 | 169 | PANTHER | INGRESSION PROTEIN FIC1 | 7 | 134 | - | - | |
| Vian9g00727 | 169 | SMART | C2_3c | 7 | 104 | IPR000008 | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Vian9g00727 | Vian-Chr9 | 9392428 | 9392937 | Wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Vian9g00727 | - | - | vra:106773894 | 265.003 |