Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian9g00707 ATGTCTTCACGTTTTGTCTTTCTTCTCCTCCTTGTAGTCATCTCTGCAACGCATTCAAATGCATACCCTTTATCAACGCAGAACAGATGGATCATAGATGAAGCAACAGGACAACGTGTGAAGTTGGTGTGTGCCAATTGGGCTGGCCACCTTCAACCAATGATGCCTGAGGGTCTTGACAAAAGACCATTGAAGGAAATTGTTGGTGAGCTTGTGAAGCGCAACTTCAACTGCGTGCGTCTCACCTATGCAATCTACATGTGGACACGCTTTTCTCATGAGAATGTGAGTGCCAACTTAGCCTCTTTGGATGTACCAGAAGTGGTTGAAGGGATTGCCAAGAACAACCCTTCTGTGTTGTCCATGACACACATTCAGACCTTTCATGCTGTTGTTCAAGAACTTGGAGCTCAGAATGTGAAAGTGTTGCTTGATAACCATGTCAGTGAGCCAATGTGGTGCTGCAATGATGATGATGAGAATGGCTTCTTCCATGACAGACATTTCAATCCTCAGGAATGGGTGCTTGGCCTTACTATGGCTGCTGAACACTTCAATGGAAACCCTGCTGTTGTGGCAATGAGTTTGAGGAATGAGCTGCATGGCCCTCGCCAAAATTTGAAGGATTGGTACAGGTACATGAGCCAAGGAGCAGTAGCTATTCACAATGCAAATCCAAATGTGCTAGTGCTTATCTCAGGTTTGAACTATGACACTGAGTTGCAGTTTTTAAGGAAAAAACCATTGAAGATAGACTTGGGTAAGAAAATGGTGTTTGAGACACATTTGTACTCATGGTCTGGAATTGGAACCCTCAAATTGAAAGAGATATGGACAAAGCAACCATTGAATAGGATATGTGCCAACAACGTTAAAGCCATAGACTACAGAGCTGGATTCCTTACCACTGGCGAGAATGCAGCTCCTTTGATTTTTACAGAGTTTGGATTCAATGAGGCAGGTTCTTCAGAAGAAGACAACAGGTTCTTGACATGCCTTCAAACCTATCTTCTTGGAAAGGATATGGACTGGGGATTTTGGGCTTTCCAAGGTAGCTACTATTTGAAGAAAGACCAGGTCCAAGTTGAGGAGTCATTTGGTGTAATGGATGCAACATGGCGTAACCTTAGATATCCCAATTTCACCGACAAGTTCCAGCTTTTGCAAAGAAAGAATATTGAACCTAACTCCATGGCCCCCATTGTAAATATCTTGTACCACCCACTATCTGGTCAATGTGCTCAAGTGAATGAGAGGAATGAAGTTGAACTTGGAAGCTGTGAGAGCAAACACAGATGGGTTCGTGGAGAAGATGAGACTAAAATGCTTTTACATGGCTCTGAGAAGTGTTTAACAGCAACTGGTGAAGGGCTTCCAGTTGTAGTTTCTGATTGTGAAAGGAAGAACAGTTCATGGAAATCTGAATCTCTTTCTAAACTTCACTTGGCAATGAATGAACAGGAGGAACAACTTTGCTTGCAGAAGGATTCTAACTCATCCACCATTGTGACTGCAAAGTGTATCTGCATAAAAGATGATTCTGAATGTCTTGATGATCCTCAAAGCCAGTGGTTCCAGCTTGTTAAAACCAATGTGTAG 1599 0.4284 MSSRFVFLLLLVVISATHSNAYPLSTQNRWIIDEATGQRVKLVCANWAGHLQPMMPEGLDKRPLKEIVGELVKRNFNCVRLTYAIYMWTRFSHENVSANLASLDVPEVVEGIAKNNPSVLSMTHIQTFHAVVQELGAQNVKVLLDNHVSEPMWCCNDDDENGFFHDRHFNPQEWVLGLTMAAEHFNGNPAVVAMSLRNELHGPRQNLKDWYRYMSQGAVAIHNANPNVLVLISGLNYDTELQFLRKKPLKIDLGKKMVFETHLYSWSGIGTLKLKEIWTKQPLNRICANNVKAIDYRAGFLTTGENAAPLIFTEFGFNEAGSSEEDNRFLTCLQTYLLGKDMDWGFWAFQGSYYLKKDQVQVEESFGVMDATWRNLRYPNFTDKFQLLQRKNIEPNSMAPIVNILYHPLSGQCAQVNERNEVELGSCESKHRWVRGEDETKMLLHGSEKCLTATGEGLPVVVSDCERKNSSWKSESLSKLHLAMNEQEEQLCLQKDSNSSTIVTAKCICIKDDSECLDDPQSQWFQLVKTNV 532
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian9g00707 532 SUPERFAMILY (Trans)glycosidases 21 376 IPR017853 -
Vian9g00707 532 Pfam Cellulase (glycosyl hydrolase family 5) 61 348 IPR001547 GO:0004553|GO:0071704
Vian9g00707 532 SUPERFAMILY Ricin B-like lectins 404 507 IPR035992 -
Vian9g00707 532 PANTHER CELLULASE FAMILY PROTEIN (AFU_ORTHOLOGUE AFUA_5G14560) 9 531 - -
Vian9g00707 532 Gene3D Glycosidases 21 391 - -
Vian9g00707 532 Gene3D - 403 527 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian9g00707 Vian-Chr9 9097404 9099463 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian9g00707 21 529 Glycoside Hydrolase AT1G13130 39.072 8.10e-134 398
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian9g00707 K01179 - egr:104441706 567.77