Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian9g00684 ATGTACCACCAACCCAGAACCCGACAACTCAAACCCACTACCTTCTTCTCTTCTCTCTTCTGCCCAAAATGCCCTCTCAACCACAACCTCCTTCTTCTCCTTCCCAAGCCCAGCAAAAAGCCCACCATCTCCGCCTCTCTGCCTACCGGGCCCGCCTCCGGGCCCGACCAGGCCCTAATCTCCCTCCTCCGCTCCATCCCGGACTGGGCCGACACGGTGCAGGAGCGCGGCATGCAGAAGAAGCGCTCCCTCTACACCCACCTGAACTGGCGCGACCACCGCAGCTCTATCCGCCACCTCCGTCACCTCCTCTCTAGCCTCTCCTCCCGCGTCATCCTCTCCCTCGTACCCCCTGTCCTCTTCTTCACCGGCTTCGCCGCCGCCATCGCCTCCTACAACCAAGCCCTAATCCACCACATCCTCCCCGACTTCCTCCCCCTCCTCCACTCCTCCTCCCTCCCCTACCAGCTCACCGCCCCCGCCCTCGCCCTCCTCCTTGTGTTCCGCACCGAAGCCTCTTACGCTCGTTTCGTCGACGGCAAGAAGGCCTGGACCAACGTCATCGCCGGTACCCACGATTTCGCCAGACAAGCCGCCGCCTTCCTTGACGACGTCGATAACGCCGACTTCTCCGTCAAGCACGCGCTTTTGCAGTACATCATCGCCTTCCCCATTGCGCTTAAGTGCCACGTGCTGTATGGTTCGGATATTAGGAGAGATCTTCAGCATTTGCTGGAAGTGGATGATCTAGCAGTGGTAATGAATTCAAAGCACCAGCCACGCTGCATTATTGAGTTTATATCGCAGAGCATTCGGTTGCTGAAATTGGAGGAGTCTAGAAGAAATGTGCTGGAATCAAAGATCTCTTGTTTCCATGAAGGAATTGGCATATGTGAACAACTTATGGGCATTCCCATTCCATTATCATATACTCGTTTGACATCAAGGTTCCTTGTCCTGTGGCATCTGACACTACCTATCATACTTTGGGACGATTGTCATTGGATTGTGGTTCCTGCAACTTTTATTAGCGCTGCCTCTTTGTTTTGCATTGAAGAAGTTGGAGTTCTCATTGAGGAGCCATTTCCAATGCTTGCACTTGATGAACTATGCCAAAAGGCACAGAATGACATCCAAGAAGCAATTGCAACCGGGAATTTAATCCATGCACGCTTTGTTGCTAAGAAAAATAGCCACTCTGAAGAGCATTCACCAAATGGCTGGCCCAACTCCTAA 1236 0.5348 MYHQPRTRQLKPTTFFSSLFCPKCPLNHNLLLLLPKPSKKPTISASLPTGPASGPDQALISLLRSIPDWADTVQERGMQKKRSLYTHLNWRDHRSSIRHLRHLLSSLSSRVILSLVPPVLFFTGFAAAIASYNQALIHHILPDFLPLLHSSSLPYQLTAPALALLLVFRTEASYARFVDGKKAWTNVIAGTHDFARQAAAFLDDVDNADFSVKHALLQYIIAFPIALKCHVLYGSDIRRDLQHLLEVDDLAVVMNSKHQPRCIIEFISQSIRLLKLEESRRNVLESKISCFHEGIGICEQLMGIPIPLSYTRLTSRFLVLWHLTLPIILWDDCHWIVVPATFISAASLFCIEEVGVLIEEPFPMLALDELCQKAQNDIQEAIATGNLIHARFVAKKNSHSEEHSPNGWPNS 411
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian9g00684 411 PANTHER UPF0187 PROTEIN YNEE 78 403 IPR044669 -
Vian9g00684 411 Pfam Bestrophin, RFP-TM, chloride channel 93 371 IPR021134 GO:0005254
Vian9g00684 411 PIRSF UCP016988 17 411 IPR024701 GO:0005247|GO:0042548
Vian9g00684 411 Coils Coil 364 384 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian9g00684 Vian-Chr9 8688228 8691457 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian9g00684 K08994 - gmx:100790216 650.973
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian9g00684 9 8688228 8691457 Vian9g00684 9 8688228 8691457 ECH