Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian9g00680 ATGGAGAATGTAGATGTCAGAGAAGAATCATCAAATTGTGTCAATGAAGTAGAAGACACCAATTCTGTACTTATCTATGGCCTTCCAGATGATATATCTCTTATGTGCCTGGCAAGAGTTCCTAGAAAATATCATCCAATCCTGAAGTGTGTCTCAAAGAGATGGAGGGACTTAATTTGTAACGAAGAGTGGTGCACTTACCGTCGGAAGCACAAACTGGATGAAACCTGGATTTATGCTCTGTGCAGGGACAAATTAAATGAGACTTTCTGTTATGTATTGGATCCAACCGCCTTATTAAGAAATTGGAAGCTGGTTGATGGTATTCCACCTCACATCTCAAAAAGAAAAGGCATGGGTTTTGAAGCTTTGGGAAATAAGCTATTCTTGTTGGGTGGTTGTAGCTGGTCAATAGATTGTACTGATGAGGTTTATTCATATGATGCTTCCTCAAACTGTTGGGTTCAAGCTACTTCCATGTCAACTGCTAGGTGCTTCTTTTCTTGTGAAGTTTTGGATGAAAAACTATATGCTATCGGAGGATTAGCTTCAAATCCAACCTATTCTCATTCTTGGGATACTTTTGACCCTCTGACAAATTGTTGGAGATCTCAGAGAGATATTGCTGTTTTTTCTGATGTTGAAGATTCAGTAGTTCTTGGTGGGAAGATATACGTCCGATTTTCCAGATACCCTGTAACTCCTCATGTATTTGCCATTGTATATGATCCATCAAGTGGCACATGGCAGTATGCAGATGCTGACATGGTTTCAGGGTGGACAGGCCCTGCAGTTGTTGTGGATGACACCCTCTATGTCTTGGATCAAACTTTAGGAACTAGGTTAATGATGTGGCACAAAGGGAGACGCCAGTGGATACAGGTTGGAAAACTATCACCACTGCTTACTAGACCACCTTGTCAGCTTGTTGCAGTTGGTAGAAGCATTTTCATTGTTGGGAAAATGCTTAGCACTGTGGTTGTTGATGTTGGTAATTTGGGGAATGAGGGCCAGGTGTTGATGAGTTCTTCCATACCAGGATTGTTATCTGATTTCACTGTAATAAGTTGTAAATGCTTAGCAATCTGA 1089 0.4086 MENVDVREESSNCVNEVEDTNSVLIYGLPDDISLMCLARVPRKYHPILKCVSKRWRDLICNEEWCTYRRKHKLDETWIYALCRDKLNETFCYVLDPTALLRNWKLVDGIPPHISKRKGMGFEALGNKLFLLGGCSWSIDCTDEVYSYDASSNCWVQATSMSTARCFFSCEVLDEKLYAIGGLASNPTYSHSWDTFDPLTNCWRSQRDIAVFSDVEDSVVLGGKIYVRFSRYPVTPHVFAIVYDPSSGTWQYADADMVSGWTGPAVVVDDTLYVLDQTLGTRLMMWHKGRRQWIQVGKLSPLLTRPPCQLVAVGRSIFIVGKMLSTVVVDVGNLGNEGQVLMSSSIPGLLSDFTVISCKCLAI 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian9g00680 362 SMART kelc_smart 127 174 IPR006652 GO:0005515
Vian9g00680 362 SMART kelc_smart 175 221 IPR006652 GO:0005515
Vian9g00680 362 Pfam F-box domain 27 61 IPR001810 GO:0005515
Vian9g00680 362 SMART fbox_2 28 68 IPR001810 GO:0005515
Vian9g00680 362 Pfam Kelch motif 116 161 IPR006652 GO:0005515
Vian9g00680 362 Pfam Kelch motif 163 204 IPR006652 GO:0005515
Vian9g00680 362 SUPERFAMILY Kelch motif 89 323 IPR015915 GO:0005515
Vian9g00680 362 CDD F-box_AtAFR-like 24 68 - -
Vian9g00680 362 SUPERFAMILY F-box domain 25 64 IPR036047 GO:0005515
Vian9g00680 362 Gene3D - 68 338 IPR015915 GO:0005515
Vian9g00680 362 PANTHER OS02G0202900 PROTEIN 16 332 IPR045887 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian9g00680 28 303 Miscellaneous Gene Families AT4G33900 27.575 3.59e-15 74.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian9g00680 - - pvu:PHAVU_010G098100g 680.633
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian9g00680 9 8598531 8600247 Vian9g00680 9 8598531 8600247 ECH