Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian9g00678 ATGTCATTTTTGTGTGGGCTTCCTGTCATTGAGTGTGTTTATTGTCTGGCCTGTGCTCGTTGGGCATGGAAAAAATGTCTGTACAGTGCAGGCTATGAGAGTGAAAATTGGGGGCTGGCTACTGCACAAGAATTTGAGCCTGTTCCTCGGATCTGTCGGCTAATCTTAGCCGTCTACGAAGATGATATTCGTAACCCTCAATGGGCTCCCGAAGGAGGTTATGGCATTAATCCTGATTGGGTTATCTTACGGAAGGACTACGGCGATAACCAAGGCCGTGTTACACCATACATGATATACCTTGATCATGATCATGCTGAAATCATACTAGCTGTTAGTGGACTCAATTTAGCAAAGGAAAGTGATTATGTTGTTTTGCTTGATAATAAGCTGGGACAGGCTGAATTTCATGGCGGTTATGTTCATAATGGATTATTGAAGGCAGCTGGATGGGTTTTTGACGCAGAATATGAGGTTCTTAGGAAGCTAGTGGCAGAAAATCCAACTTATATGTTAATATTTACAGGGCATTCTCTAGGGGCTGGGGTGGTGGCATTGTTGACAATGCTAGCAGTTCATAATCGAGACAAATTGGGTATACCGAGAAACAAGATAAGATGCTTTGCAATAGCTTCTCCTCGGTGTATGTCTCTCAACTTGGCTGTAAGATATGCAGATGTGATCAATTCTGTTGTACTCCAGGATGATTTTTTACCTCGGACGACCGCTGCTTTGGAAGTTGTCTTCAAATCACTTTTATGTTGGCCCTGCTTATTGTGTATAATGTGCTTAAAGGATACCTGCACATTGGAGGAGAAGAAGCTCAGAGATCCAAGGCGTCTATATGCACCTGGTCGGCTCTATCACATTGTGGAGCGAAAACCATTTAGGATGGGAAGATTTCCACCTGTTGTTAGGACAGCAGTACCTGTTGATGGGAGGTTTGAGCATTTAGTTCTTTCTTGCAATGCAACTTCTGATCATGCCATCATTTGGATAGAGAGAGAATCCCGACGGGCACTCAGTTTAATGCGAGACAAAGACGAGAATATGGAGATTCCAGCAAAGCAGAAGATGGAGAGGCATGAATCCATAGCTCGAGAACACAGTGAAGAGTACCATGCAGCCCTTCAGAGAGCAGTTGCTTTGGATATTCCACAAGCATACTCTCCTTCATCATATGGAACATTTCATGAAACTGATGTTGGAGAGGATTCTGGACGATCAACTGAAGGTTCCTCCTTGTTTCATAAGAAACGAACACAAAGTTGGAATGAATTTGTTGGACGTTTGTTTGATGTGGATGATTCAGGTCATATGGTGTTCAAAAAGACACCTCCATGA 1344 0.4315 MSFLCGLPVIECVYCLACARWAWKKCLYSAGYESENWGLATAQEFEPVPRICRLILAVYEDDIRNPQWAPEGGYGINPDWVILRKDYGDNQGRVTPYMIYLDHDHAEIILAVSGLNLAKESDYVVLLDNKLGQAEFHGGYVHNGLLKAAGWVFDAEYEVLRKLVAENPTYMLIFTGHSLGAGVVALLTMLAVHNRDKLGIPRNKIRCFAIASPRCMSLNLAVRYADVINSVVLQDDFLPRTTAALEVVFKSLLCWPCLLCIMCLKDTCTLEEKKLRDPRRLYAPGRLYHIVERKPFRMGRFPPVVRTAVPVDGRFEHLVLSCNATSDHAIIWIERESRRALSLMRDKDENMEIPAKQKMERHESIAREHSEEYHAALQRAVALDIPQAYSPSSYGTFHETDVGEDSGRSTEGSSLFHKKRTQSWNEFVGRLFDVDDSGHMVFKKTPP 447
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian9g00678 447 Gene3D alpha/beta hydrolase 39 253 IPR029058 -
Vian9g00678 447 PANTHER ALPHA/BETA-HYDROLASES SUPERFAMILY PROTEIN 1 444 - -
Vian9g00678 447 MobiDBLite consensus disorder prediction 401 415 - -
Vian9g00678 447 MobiDBLite consensus disorder prediction 394 416 - -
Vian9g00678 447 CDD Lipase_3 44 240 - -
Vian9g00678 447 SUPERFAMILY alpha/beta-Hydrolases 44 249 IPR029058 -
Vian9g00678 447 Pfam Lipase 3 N-terminal region 10 74 IPR005592 GO:0016042
Vian9g00678 447 Pfam Lipase (class 3) 116 242 IPR002921 GO:0006629
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian9g00678 Vian-Chr9 8554617 8576170 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian9g00678 1 445 Miscellaneous Gene Families AT3G49050 61.311 0.0 599
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian9g00678 - - gmx:100800227 872.848