Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian9g00675 ATGGAAAATTCATCCAACTTTGATGAAAACTCTGATGTGGGGTACCAACCTTCACATTCTTCTGTGGATCAAAATGACCATTCAATCACTGAAACTGTTGGATACTCCACATTCAGTGGCGATTCCTTTGCGTATTGCAGGACTAACTCTGAGGTCTCAAACTTCTCTGAGCCTATTGATGACAATAGCTTTAGAAGTGAACATTCACCTTCTCTATGGACACCTGTGAAACATGGAGCAAGTCAAGCTGTTCTTTCAAGGTTAGGAATGAAGCAACCCAGGAACTCAATGGATGATAAATCTGAGGATCTTGATCTCTTGGAGTCAGAGCTTGATATGATGAGGGAAAGATTTTCAAAGCTTCTATTGGGGGAAGACATGTCTGGTGGTGGGAAAGGTGTTTGCACTGCAGTTACAATATCAAATTCAATCACCAACCTCTATGCAACTGTTTTTGGGCAAAATTTAAAGTTGGAGCCTCTTAATCCTGAGAAGAAGGCCATGTGGAAAAGAGAAATGAATTGTCTCCTATCTGTGTGTGATTACATAGTAGAATTTGCCCCAACTGCACAATATTTAGAAGATGGTACAATTGTGGAGATGATGACAAGTAGACCAAGGTCAGATATTTATATCAACCTCCCAGCTCTTCAAAAGCTTGACACAATGCTCATAGAAATATTGGACAGTTTCCATGACACTGAATTTTGGTATGCAGACCAAGGGAGCTTATCAGGTAACTCAACTCGGTCACGTGCAGGCTCATTTCGAAGGATTGTTCAGAGGAAAGATGAGAAATGGTGGCTTCCAGTTCCTTGTGTTCATCCTGGAGGCCTCTCTGAAAAGTCAACAAAACACTTGAACAAGTTCTCACCAGATTACCTTCTTGATTGTCTCAAAATAAGTTCTGAACATGAAGCACTTGAGCTGGCAGACAAGGTTGAGTCTTCAATGTTCACTTGGAGGAGAAAAGCTTGTCTGAGCCATTCAAAAACATCATGGAACAAAGTTAAGGATCTCATGGCTGACACTGACCGAAGTGACAAAAACTACACTTTAGCTGAGAGAGCTGAAACCTTGTTGTTTTGCTTGAAGCAAAGATATCCTGAGCTCTCACAAACATCCTTGGACACATGCAAGATTCAATATAACAGGGATGTTGGAAAGGCAATATTAGAGAGCTACTCAAGAGTATTAGAAGGCTTAGCATTCAACATTGTAGCTTGGATTGAAGATGTTCTTCATGCAGATAAATCAGCAAGGAAATAA 1269 0.4058 MENSSNFDENSDVGYQPSHSSVDQNDHSITETVGYSTFSGDSFAYCRTNSEVSNFSEPIDDNSFRSEHSPSLWTPVKHGASQAVLSRLGMKQPRNSMDDKSEDLDLLESELDMMRERFSKLLLGEDMSGGGKGVCTAVTISNSITNLYATVFGQNLKLEPLNPEKKAMWKREMNCLLSVCDYIVEFAPTAQYLEDGTIVEMMTSRPRSDIYINLPALQKLDTMLIEILDSFHDTEFWYADQGSLSGNSTRSRAGSFRRIVQRKDEKWWLPVPCVHPGGLSEKSTKHLNKFSPDYLLDCLKISSEHEALELADKVESSMFTWRRKACLSHSKTSWNKVKDLMADTDRSDKNYTLAERAETLLFCLKQRYPELSQTSLDTCKIQYNRDVGKAILESYSRVLEGLAFNIVAWIEDVLHADKSARK 422
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian9g00675 422 Coils Coil 97 117 - -
Vian9g00675 422 MobiDBLite consensus disorder prediction 1 26 - -
Vian9g00675 422 FunFam Rop guanine nucleotide exchange factor 14 103 332 - -
Vian9g00675 422 Gene3D PRONE domain, subdomain 1 384 418 - -
Vian9g00675 422 Gene3D PRONE domain, subdomain 2 288 383 - -
Vian9g00675 422 PANTHER ROP GUANINE NUCLEOTIDE EXCHANGE FACTOR 1 47 288 IPR038937 GO:0005085
Vian9g00675 422 Pfam PRONE (Plant-specific Rop nucleotide exchanger) 288 421 IPR005512 GO:0005085
Vian9g00675 422 Pfam PRONE (Plant-specific Rop nucleotide exchanger) 109 288 IPR005512 GO:0005085
Vian9g00675 422 ProSiteProfiles PRONE domain profile. 101 422 IPR005512 GO:0005085
Vian9g00675 422 FunFam Rop guanine nucleotide exchange factor 2 278 383 - -
Vian9g00675 422 Gene3D PRONE domain, subdomain 1 105 253 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian9g00675 Vian-Chr9 8499713 8501997 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian9g00675 - - gmx:100785956 729.554
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian9g00675 9 8499713 8501997 Vian9g00675 9 8499713 8501997 ECH