Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian9g00661 ATGGCGACAGCAAGACGAAACTTCCCGTCGATAACAGAATGCAACGGAACCAACTCGTCGCCGAGGGAGTCCGTTGCCGCTGACCTCGACGGCACGCTCCTCATCTCCCGCAGTTCATTCCCGTACTTCATGATGGTGGCCGTCGAAGCCGGCAGCCTCCTCCGTGGCTTCATCCTCCTCCTCTCCGTTCCGCTCATCATCTTCGCTTACCTCTTCGTCTCAGAATCCCTCGGCATCCAGATCCTCATCTTCATCTCCTACTCCGGACTCAAGATCCGTGACATCGAACTCGTGTCACGTGCGGTTCTCCCTAGGTTTTATGCTGCGGACGTGAGAAAGGAGAGCTTCGAGATGTTCGACCGGTGCAAGAGGAAGGTCGTGGTGACGGCGAATCCAACAGTGATGGTGGAGCCGTTCGTGAAGGACTTTCTTGGTGGAGACAAGGTGCTGGGAACGGAAATCGAAGTGAATCCGAAGACGAAGAAGGCTACCGGATTCGTGAAGAAGCCTGGCGTGCTCGTCGGAAAGTGGAAGCGTCTAGCCGTTGCAAAAGAGTTCGCTGAGGAGTCGCCGGACATTGGACTCGGAGATCGTAAAACTGACTTCGATTTCATGTCTATTTGCAAGGAGGGTTACATGGTGCCTCCGAGCAAATCAGCAAAACCAGTCCCACAGGAGCGACTTAAGAGCAGGATAATCTTCCACGACGGTCGTTTCGTGCAGAAGCCAGACCCACTCAACGCTCTCATCACCTTCCTATGGCTACCCTTTGGTTTTATTCTCTCCATTATACGGGTCTACTTCAACCTTCCCCTCCCCGAACGCATCGTGCGCTACACCTACGAAATGCTCGGCATCAAGCTCGTCATCCGTGGCCACCGCCCTCCACCACCGTCTCCTGGCACCCCCGGCAACCTCTACGTATGCAACCACCGCACCGCCCTTGACCCCATCGTCATCGCTATCGCCCTCGGCCGCAAGGTCTCCTGCGTCACCTACAGCGTCAGCAAGCTCTCCCGCTTCCTTTCGCCCATCCCCGCCGTCGCCCTCACTCGCGACCGCGCTGCCGACGCCGCCCGCATCACCGAGATCCTCCAGAAGGGTGACCTGGTCGTCTGCCCCGAAGGCACGACGTGTCGCGAGCCCTTTTTGCTTCGCTTCAGCGCCCTCTTCGCCGAACTGAGCGACAGAATCGTTCCCGTGGCTGTGGACTGCAAGCAGAACATGTTCTTTGGAACCACTGTTCGTGGTATAAAATTCTGGGACCCTTACTTCTTCTTCATGAACCCTAGGCCAGTTTACGAGGTTACCTTCCTGGAGCCGTTGCCGGAGGAGATGTCGTGCAAGGCAGGGGGAAAGAGCTCAATTGAGGTGGCGAATCATGTGCAGAAGGTGTTGGGGGATGTGTTAGGGTTCGAGTGCACGGGGTTGACTAGGAAGGATAAGTACATGCTGTTGGGTGGGAATGATGGGAAGGTGGAGTCTCTGTATGGTTCTAAGAAGTAA 1506 0.5611 MATARRNFPSITECNGTNSSPRESVAADLDGTLLISRSSFPYFMMVAVEAGSLLRGFILLLSVPLIIFAYLFVSESLGIQILIFISYSGLKIRDIELVSRAVLPRFYAADVRKESFEMFDRCKRKVVVTANPTVMVEPFVKDFLGGDKVLGTEIEVNPKTKKATGFVKKPGVLVGKWKRLAVAKEFAEESPDIGLGDRKTDFDFMSICKEGYMVPPSKSAKPVPQERLKSRIIFHDGRFVQKPDPLNALITFLWLPFGFILSIIRVYFNLPLPERIVRYTYEMLGIKLVIRGHRPPPPSPGTPGNLYVCNHRTALDPIVIAIALGRKVSCVTYSVSKLSRFLSPIPAVALTRDRAADAARITEILQKGDLVVCPEGTTCREPFLLRFSALFAELSDRIVPVAVDCKQNMFFGTTVRGIKFWDPYFFFMNPRPVYEVTFLEPLPEEMSCKAGGKSSIEVANHVQKVLGDVLGFECTGLTRKDKYMLLGGNDGKVESLYGSKK 501
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian9g00661 501 SMART plsc_2 305 406 IPR002123 GO:0016746
Vian9g00661 501 SUPERFAMILY Glycerol-3-phosphate (1)-acyltransferase 220 491 - -
Vian9g00661 501 FunFam Glycerol-3-phosphate 2-O-acyltransferase 6 107 226 - -
Vian9g00661 501 PANTHER ANCIENT UBIQUITOUS PROTEIN 23 495 - -
Vian9g00661 501 CDD LPLAT 281 442 - -
Vian9g00661 501 MobiDBLite consensus disorder prediction 1 23 - -
Vian9g00661 501 SUPERFAMILY HAD-like 25 220 IPR036412 -
Vian9g00661 501 Gene3D - 101 229 IPR023214 -
Vian9g00661 501 Pfam haloacid dehalogenase-like hydrolase 26 205 - -
Vian9g00661 501 Pfam Acyltransferase 304 394 IPR002123 GO:0016746
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian9g00661 Vian-Chr9 8248997 8253139 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian9g00661 6 501 Acyl Lipid Metabolism Gene Families AT4G00400 79.234 0.0 794
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian9g00661 K13508 - gmx:100794137 924.08
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian9g00661 9 8248997 8253139 Vian9g00661 9 8248997 8253139 ECH