Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian9g00611 ATGGCGTCTTTGTTGCGAGCGAGAAACGCTTCTCGTGGCTCTATGGCTAGTCTTCTGCGGAGCTTCAGCAACGTTCCCGAGAACACCGTCTATTCGGGTCCCACGGCGCAGACCCCGAACAAGCGAGTCACGCTCAGGCATTTGAGAGAGAAGCACAAATCATCCCAACCTATCACCATGGTCACCGCATACGATTACCCCGCCGCCGTCCACCTCGACACCGCCGCCGTCGACATCTGTCTCGTAGGCGACTCCGCTGCCATGGTGGTCCACGGCCACGACACCACGCTTCCCATCACGCTCGACGAGATGCTTGTCCACTGCCGCGCCGTGGCACGTGGCGCCAAGACGCCGCTCCTCGTCGGGGACTTGCCTTTCGGAACCTACGAGTCCGATCCCAATCAGGCGGTGGATACAGCGGTTAGGATTCTGAAGGAAGGGGGAATGGATGCGATAAAACTTGAAGGAGGGTCTCCTTCCAGAATTGTTGCTGCGAAGGCTATTGTTGAGGCTGGAATTGCTGTGATGGGCCATGTGGGTCTTACTCCTCAGGCCATTAGTGTTTTAGGGGGGTTTAGACCTCAAGGAAGAAATGTTGCCAGTGCTGTTAAGGTTGTAGAGACTGCATTGGCTTTGCAAGAAGCAGGGTGTTTTTCTGTTGTTCTGGAATGTGTGCCTCCGCCCGTTGCCGCCGCAGCAACGGCAGCCCTTCAAATTCCCACAATTGGAATTGGTGCTGGACCCTTTTGCAGTGGACAGGTGCTGGTTTACCATGATCTGCTTGGTATGCTACAACACCCCCACCATGCAAAGGTCACTCCAAAATTCTGTAAGCAGTATGCACGTGTAGGAGACGTCATCAATAAAGCTTTACTGGAGTATAAGGAAGATGTTACAAATGGTTCGTTTCCTGATGTTCACCATAGCCCCTACAAAATAAGCAAGACAGATGCAGATGTTTTTTCAAGTGAGTTGCAGAAGTTAGGTTTGGACAAGGCAGCGTCCGCAGCATTTGAAGCAGTTCAGAAAATGGATACGGCTTAG 1044 0.5278 MASLLRARNASRGSMASLLRSFSNVPENTVYSGPTAQTPNKRVTLRHLREKHKSSQPITMVTAYDYPAAVHLDTAAVDICLVGDSAAMVVHGHDTTLPITLDEMLVHCRAVARGAKTPLLVGDLPFGTYESDPNQAVDTAVRILKEGGMDAIKLEGGSPSRIVAAKAIVEAGIAVMGHVGLTPQAISVLGGFRPQGRNVASAVKVVETALALQEAGCFSVVLECVPPPVAAAATAALQIPTIGIGAGPFCSGQVLVYHDLLGMLQHPHHAKVTPKFCKQYARVGDVINKALLEYKEDVTNGSFPDVHHSPYKISKTDADVFSSELQKLGLDKAASAAFEAVQKMDTA 347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian9g00611 347 Hamap 3-methyl-2-oxobutanoate hydroxymethyltransferase [panB]. 43 310 IPR003700 GO:0003864|GO:0015940
Vian9g00611 347 FunFam 3-methyl-2-oxobutanoate hydroxymethyltransferase 40 315 - -
Vian9g00611 347 Pfam Ketopantoate hydroxymethyltransferase 42 305 IPR003700 GO:0003864|GO:0015940
Vian9g00611 347 CDD KPHMT-like 45 304 IPR003700 GO:0003864|GO:0015940
Vian9g00611 347 SUPERFAMILY Phosphoenolpyruvate/pyruvate domain 42 308 IPR015813 GO:0003824
Vian9g00611 347 PANTHER 3-METHYL-2-OXOBUTANOATE HYDROXYMETHYLTRANSFERASE 32 327 IPR003700 GO:0003864|GO:0015940
Vian9g00611 347 NCBIfam 3-methyl-2-oxobutanoate hydroxymethyltransferase 42 309 IPR003700 GO:0003864|GO:0015940
Vian9g00611 347 Gene3D - 40 322 IPR040442 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian9g00611 K00606 - gmx:100808841 596.66