Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian9g00589 ATGAAAGATTCGAATTCGGATCTATTTGACCCGGTTGTGGCCATGGAATCCGACTGGTCTCGCGCTGGTTCCACTTCCGACGCCGATTTCGCCTTCGCCTTCAACGACAGCAATTTCTCCGACAGGGTTCTTCGGATCGAGATCATGGCTAACCCTGCAGACGCCGGACCCGATTCCGATGGCTGCGCCACCATTGCCGATTGGGCGCGCCACCGCAAGCGTCGCCGTGAGGATATCAGAAAGGACACAGGCACGGAACCTGCTGCTATGCCAGACGAGCAAATTTTGAACGGGAATCAACCTGATGTGGATGAGCGTGAAAACCAAGATGAGGAGGCTGTTGCAATGGTTGAAGAACCTCATTCTGGTGATGAAGCTACAAATAGTCATGATTCGGACTGGAGCATGGACTGCTCTGCAGGTGCCGTTGTTAGAGTTAAAACGCTGCACATAAGTTCTCCTATCTTGGCTGCTAAAAGTCCTTTCTTTTATAAGCTTTTCTCAAATGGGATGAGGGAGTCTGAGCAGAGACATGTTTCCCTCAGAATTAATGCCTCAGAAGAAGCTGCTCTCATGGAGTTGCTGAACTTTATGTACAGTAATACCTTGACCACTACTACAGCACCTGCTTTGCTGGACGTGTTGATGGCTGCTGACAAATTTGAAGTTGCTTCGTGCATGAGATACTGTAGCCGGTTATTGCGGAACATGCCTATGACACCTGACTCTGCTTTGCTTTATCTGGAGCTTCCTTCTAGTGTCTTAATGGCCGATGCAGTCCAACCGTTGACTGATGCTGCAAAGCAGTATCTGGCTGGTCGATACAAGGATATAACCAAGTTCCAGGAAGAGGTCATGGCCTTGCCCCTAGCTGGAGTAGAGGCAATACTGTCTAGCGATGATCTCCAGGTTGCATCAGAGGATGCTGTATATGATTTTGTGTTGAAGTGGTCTCGACAGCAGTACCCTAAACTGGAAGAAAGGCGAGAAGTCTTGGGTGCCCATCTTGCTCGTTTAATTCGCTTCCCTTACATGACCTGCCGAAAGCTTAAGAAGGTATTAACCTGTTCTGACTTTGACCATGATGTTGCATCCAAGCTTGTACTGGAGGGCCTATTTTTCAAGGCTGAGGCTCCACACCGCCAACGGGCACTGGCAGCAGAAGACTCTGCTTCTTCAAACCGTAGATTTGTGGAGAGGGCATATAAGTACCGGCCGGTGAAGGTGGTTGAATTCGAACTTCCCCGGCAGCAGTGTGTAGTGTACTTGGATCTGAAGAGGGAGGAGTGCGCCAATCTATTTCCATCTGGGCGGGTATATTCTCAGGCATTCCATTTGGGTGGTCAAGGTTTTTTCCTATCAGCACATTGTAACATGGATCAACAAAGCTCTTTCCATTGCTTTGGGCTGTTTTTGGGAATGCAGGAGAAGGGGTCAGTGAGCTTTGCTGTTGACTATGAGTTTGCTGCAAGGTCTAGGCCAACAGAAGAATTCGTTAGCAAGTACAAAGGTAACTACATGTTCACAGGGGGAAAGGCCGTTGGGTATAGAAACTTGTTTGCTATTCCATGGACATCGTTTATGGCTGAGGATAGTCTTTACTTCATCAATGGTGTCCTCCATCTTAGAGCTGAGCTCACCATCAGGCACTGA 1653 0.4852 MKDSNSDLFDPVVAMESDWSRAGSTSDADFAFAFNDSNFSDRVLRIEIMANPADAGPDSDGCATIADWARHRKRRREDIRKDTGTEPAAMPDEQILNGNQPDVDERENQDEEAVAMVEEPHSGDEATNSHDSDWSMDCSAGAVVRVKTLHISSPILAAKSPFFYKLFSNGMRESEQRHVSLRINASEEAALMELLNFMYSNTLTTTTAPALLDVLMAADKFEVASCMRYCSRLLRNMPMTPDSALLYLELPSSVLMADAVQPLTDAAKQYLAGRYKDITKFQEEVMALPLAGVEAILSSDDLQVASEDAVYDFVLKWSRQQYPKLEERREVLGAHLARLIRFPYMTCRKLKKVLTCSDFDHDVASKLVLEGLFFKAEAPHRQRALAAEDSASSNRRFVERAYKYRPVKVVEFELPRQQCVVYLDLKREECANLFPSGRVYSQAFHLGGQGFFLSAHCNMDQQSSFHCFGLFLGMQEKGSVSFAVDYEFAARSRPTEEFVSKYKGNYMFTGGKAVGYRNLFAIPWTSFMAEDSLYFINGVLHLRAELTIRH 550
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian9g00589 550 SMART BACK_2 253 355 IPR011705 -
Vian9g00589 550 SUPERFAMILY POZ domain 147 235 IPR011333 -
Vian9g00589 550 MobiDBLite consensus disorder prediction 73 87 - -
Vian9g00589 550 SUPERFAMILY TRAF domain-like 437 548 - -
Vian9g00589 550 MobiDBLite consensus disorder prediction 73 113 - -
Vian9g00589 550 FunFam BTB/POZ domain-containing protein POB1 129 259 - -
Vian9g00589 550 CDD BTB_POZ_ZBTB_KLHL-like 143 221 - -
Vian9g00589 550 ProSiteProfiles BTB domain profile. 138 207 IPR000210 GO:0005515
Vian9g00589 550 FunFam BTB/POZ domain-containing protein POB1 272 376 - -
Vian9g00589 550 Pfam BTB/POZ domain 145 235 IPR000210 GO:0005515
Vian9g00589 550 SMART BTB_4 138 238 IPR000210 GO:0005515
Vian9g00589 550 Gene3D - 270 375 - -
Vian9g00589 550 PANTHER OS02G0260700 PROTEIN 17 549 IPR045890 -
Vian9g00589 550 Pfam BTB And C-terminal Kelch 261 353 IPR011705 -
Vian9g00589 550 Gene3D Potassium Channel Kv1.1; Chain A 127 258 IPR011333 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian9g00589 Vian-Chr9 6906744 6910183 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian9g00589 - - gmx:100776595 1004.2