Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian9g00584 ATGGCAGCGGCGGCGGCGGCAGTGACGGTGCTACTACCACCTAGGATTCCGACCACCACCAACGTTACCCGCTGTTCTGCTTTGCCTTCTCTGCCTCCACGTGTAACCAGCACCAGCACCACCTTGTTCTCACCTTCCCTCAACCACTTTTCAGTGTCCCGAAAATCTTTTCTGCTTCAGACCAGAGCTTCTTCAGAGGAATCATCCTCAGTAGATGCCAATGAGTTGTTCACAGATTTGAAGGAAAAGGCAAGAACATGCGCTTTCTCCTCCTTGCCAACCCTTATTTTACACAATGTTTGGTACAAACTCATTTTTAACCAAGTGGAAATAATATCCTCCGTTTATCATAATCAGTGGGATGCTGTTGAAAACAAGTCCACAGTGCTTATCTATGGTGGTGGGGCTTTAGTTGCTGTTTGGCTATCTTCCATTCTCGTGAGCGCAATCAACTCAGTTCCCTTGCTTCCAAAGATCATGGAGTTGGTAGGTCTAGGATACACTGGATGGTTTGTCTACCGATACCTTCTGTTCAAGTCTAGCAGGAAGGAGCTAGCTACAGACATTGAAGGACTGAAGAAGAAAATCACTGGAACTGAATAG 603 0.466 MAAAAAAVTVLLPPRIPTTTNVTRCSALPSLPPRVTSTSTTLFSPSLNHFSVSRKSFLLQTRASSEESSSVDANELFTDLKEKARTCAFSSLPTLILHNVWYKLIFNQVEIISSVYHNQWDAVENKSTVLIYGGGALVAVWLSSILVSAINSVPLLPKIMELVGLGYTGWFVYRYLLFKSSRKELATDIEGLKKKITGTE 200
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian9g00584 200 PANTHER - 11 199 IPR033344 GO:0009579
Vian9g00584 200 Pfam CAAD domains of cyanobacterial aminoacyl-tRNA synthetase 117 198 IPR025564 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian9g00584 Vian-Chr9 6840964 6843054 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian9g00584 - - gmx:100305578 274.633
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian9g00584 9 6840964 6843054 Vian9g00584 9 6840964 6843054 ECH