Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian9g00582 ATGGGTACCCTTAAGGTGTCCAACAGTTCATGCACATTTTCAAAATTCTTGGTAGTTTGCATGGTGGCATTTTCTTTGGTTGATTCAAGTTATGGTGACTGTGATTTTAAGGCAATCTTCAATTTTGGGGATTCAAATTCGGATACTGGTGGGTTTCATGCAGCCTTTCCTGCACAGCCTGATCCCTATGGAATGACCTTTTTCAAAAAACCAGTTGGTCGTGCTTCTGATGGAAGGCTCGTTCTTGATTTTCTTGCTCAGGGTCTAGGGCTTCCATTTTTGAGTCCATATCTTGAGTCAATTGGATCAGACTATAGCCATGGAGCTAACTTTGCATCTTCAGCTTCCACTGTGATTCCTCCCATTACTTCCTTCTTTCATAGTGGACTCAGTCCATTTTCCCTTTCCATTCAACTCAGCCAAATGAGACAATTCAAAGCCAGAGTTGATGAATTTCATCAAACAGGAACTATACCATCATCTGGTATTCCTTCACCAGATATATTCAAAAAGGCCATTTACATGTTATACATTGGCCAAAATGATCTCACTTCCAAAATAGCAGCCACTGGCAGTATTAATGGACTCATGGAAACCTTTCCTCAAATTGTTTCACAAATTAATGATGCTGTCAAGGAGCTTTATGCACAAGGGGCACGCACAATTATGGTATTCAATCTTGGTCCTGTGGGATGTTATCCAGGATATTTGGTACAGCTTCCTCATGCTACTTCTGATTTTGATGAGTTTGGATGCATCGCTTCTTACCAGAATGTTGTAAATTATTACAACAAATTGTTGAAGGACACAGTAAGCCAAACCAGACAAAGTTTACCAGATGTTTCCCTCATTCATGTAGACACTTACTCTGCTTTGTCGGAGCTCTTTCACCATCCCACACTTTATGGGTTTAAGTATGGTAGCAAAACATGTTGTGGATATGGAGGGGGTGACCACAACTTTAACCCTAAAATTTTGTGTGGTAATATGCTAGCAAGTGCTTGTGCTGAACCCCGAGAATACGTGAGTTGGGATGGAATCCATTTCACAGAAGCAGCAAACAAGATTGTTGCAAATGCTATTCTAAATGGTTCTCTTTTTGACCCCCCTTTCCCTCTCCATGAACATTGTGATATACAACCTATTGTTTGA 1152 0.4054 MGTLKVSNSSCTFSKFLVVCMVAFSLVDSSYGDCDFKAIFNFGDSNSDTGGFHAAFPAQPDPYGMTFFKKPVGRASDGRLVLDFLAQGLGLPFLSPYLESIGSDYSHGANFASSASTVIPPITSFFHSGLSPFSLSIQLSQMRQFKARVDEFHQTGTIPSSGIPSPDIFKKAIYMLYIGQNDLTSKIAATGSINGLMETFPQIVSQINDAVKELYAQGARTIMVFNLGPVGCYPGYLVQLPHATSDFDEFGCIASYQNVVNYYNKLLKDTVSQTRQSLPDVSLIHVDTYSALSELFHHPTLYGFKYGSKTCCGYGGGDHNFNPKILCGNMLASACAEPREYVSWDGIHFTEAANKIVANAILNGSLFDPPFPLHEHCDIQPIV 383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian9g00582 383 Pfam GDSL-like Lipase/Acylhydrolase 39 361 IPR001087 GO:0016788
Vian9g00582 383 SUPERFAMILY SGNH hydrolase 172 363 - -
Vian9g00582 383 CDD SGNH_plant_lipase_like 38 365 IPR035669 -
Vian9g00582 383 Gene3D SGNH hydrolase 28 365 IPR036514 -
Vian9g00582 383 PANTHER ZINC FINGER FYVE DOMAIN CONTAINING PROTEIN 17 369 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian9g00582 Vian-Chr9 6831130 6833764 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian9g00582 38 372 Acyl Lipid Metabolism Gene Families AT4G10950 28.409 4.50e-31 120
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian9g00582 - - gmx:100775514 627.091
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian9g00582 9 6831130 6833764 Vian9g00582 9 6831130 6833764 ECH