Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian9g00580 ATGGAGGTTGGATTCTTAGGTTTGGGGATAATGGGCAAGGCTATGGCAACCAACTTGCTACGCCATGGCTTCAAAGTCACTGTTTGGAACAGAACCCTCTCCAAGTGTGAAGAACTTGTGCAACATGGTGCTTCTATTGGAGAAACGCCAGCTACTGTAGTCAAGAAATGCAAGTATACAATTGCAATGCTATCTGATCCTTCCGCTGCTTTATCGGTTGTGCTTGATAAAGATGGTGTTCTTGATCATATTAATGGAAAAGGTTACATTGACATGTCAACAGTGGATGCTGATACATCCTCCAAGATATCTGAGGCTATCAAAGCAAAAGGTGGTTACTTCCTTGAAGCTCCTGTTTCGGGTAGCAAGAAGCCTGCAGAAGATGGCCAGCTGGTTATACTTGCCGCTGGGGACAAGGCATTGTATGATGAAGCACTTCCAGCATTTGACATACTGGGGAAGAAGTCTTTCTTTTTGGGTGACGTTGGAAATGGTGCAAAAATGAAACTTGTTGTGAACATGATAATGGGCAGTATGATGAATGCTTTCTCTGAGGGACTCACACTAGCTGAAAGAAGTGGTTTGGACCCTGCAACCCTTCTTGATGTGCTGGATCTTGGTGCCATAAGTAACGGCATGTTTAAATTGAAAGGACCTACAATGCTTCAAAACAGTTACTCCCCAGCATTTCCACTGAAACATCAGCAGAAGGACATGAGGTTAGCTCTTGCTCTTGGAGATGAAAATGCTGTATCAATGCCAATAGCAGCTGCAGCAAATGAGGCTTTCAAGAAGGCCAGAAGTATGGGGTTGGGAGACCTTGATTTTTCGGCAGTTCATGAAACTTACAAAGCACCTGATCGTTCATCTTGA 873 0.4399 MEVGFLGLGIMGKAMATNLLRHGFKVTVWNRTLSKCEELVQHGASIGETPATVVKKCKYTIAMLSDPSAALSVVLDKDGVLDHINGKGYIDMSTVDADTSSKISEAIKAKGGYFLEAPVSGSKKPAEDGQLVILAAGDKALYDEALPAFDILGKKSFFLGDVGNGAKMKLVVNMIMGSMMNAFSEGLTLAERSGLDPATLLDVLDLGAISNGMFKLKGPTMLQNSYSPAFPLKHQQKDMRLALALGDENAVSMPIAAAANEAFKKARSMGLGDLDFSAVHETYKAPDRSS 290
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian9g00580 290 ProSitePatterns 3-hydroxyisobutyrate dehydrogenase signature. 5 18 IPR002204 GO:0016491
Vian9g00580 290 Pfam NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase 163 281 IPR029154 GO:0051287
Vian9g00580 290 Gene3D - 1 162 - -
Vian9g00580 290 Pfam NAD binding domain of 6-phosphogluconate dehydrogenase 3 157 IPR006115 GO:0050661
Vian9g00580 290 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 1 162 IPR036291 -
Vian9g00580 290 FunFam Putative oxidoreductase GLYR1 homolog 1 162 - -
Vian9g00580 290 Gene3D - 163 285 IPR013328 GO:0016491
Vian9g00580 290 SUPERFAMILY 6-phosphogluconate dehydrogenase C-terminal domain-like 161 284 IPR008927 -
Vian9g00580 290 PANTHER OXIDOREDUCTASE GLYR1-RELATED 2 284 - -
Vian9g00580 290 PIRSF HIBADH 1 289 IPR015815 GO:0016491
Vian9g00580 290 FunFam Glyoxylate/succinic semialdehyde reductase 2 163 287 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian9g00580 Vian-Chr9 6786001 6793513 Dispersed/Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian9g00580 K18121 - gmx:100802847 536.569