Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian9g00572 ATGCCTCCTTTGACCTCGTGGCTGCTGCTCGCTATTCTCGCGCTAACAGCGCTGGCGATGCCTCCAGCACGCGCCGCGCCGGTTGCGTCGTTCGACGATCAGCGAGAGTTTGACTATTTCGTGTTGGCCTTGCAATGGCCCGGCACTTACTGCCAGCGCACGAGCAGTTGCTGTCCAACCAACGGTTGCTGCAGAGGCTCCAATTCTCCAAAAATATTCACCATACACCTCATGGAATACTTATTACTTGTTTTTCTTCAATTTGGCTACTTGCTTCGACTGTGTTCTGAGTTAATTTCTCCTTCTGAGATGGACTCTGGCCTGACTACAATGATGGAACCTGGCCATCCTGTTGTTCTAGAGCCAGTTACAATCCGAAAGAGAGATTTCCTGAAGAATGAAAGTGAATTGGCTCTCAGAGTTGTACTGGAAAGTTTATGGCCGTTTCTTGTAATATCGACTTTGACTAATGCTTTAGAGCAATATTGGCCATCATTGAGCTGTGGGAAGCCATCATTATGCCATGGTGGGAAAGGAACATTTTGGGCTCATGAGGTGGTTGTTGGAATTAAGACACATGGCACGTGCTCTTATCCTGTATTTCGAAATGAATATGATTATTTTCTGGGAGTTCTGAATGTCTATTTCAAATACAATGTTACTAGTGTTCTAAATGAAGCTGGATATGTTGCCTCTAATACAGAAAGGTATCCCCTTGGAGGCATTATCTCTGCCATTGAGAATGCTTTTCATGCCTCTCCTTTAATAATTTGCTCAAAAGATTCTATTGAGGAACTTCGTCTATGCTTTTACAAGGACTTCCAGCCCCGAGATTGTGCTGTTAGTTCTGATGTTAAAATTGACATGGTTACTTCAAAAGGATGTCCCAAGTATGTTGGCTTGCCTGAGTCGGTTTCAGTAGCAGACTCGTGTACCAGCAATCTAAGCCTCAATGTTTCTATTCCCTTTGATACAACCAACCTTCTCTGTCTTTCTGTATGGGATGCTCAAAGTTTCATCCTCAGATATGCTCAGACTTATGCAAACATTTGGAGTTTCATTCTTTCTACCCCAGACACAAATTCTTACATAGCCATGGGATTCTCTGTCAGTGGCGGCATGGTTGGTTCAAGTGCCATGGTGGGGTGGGTGGCATCAAGAGGAGCCAGTGGAGGGATCAAGCAGTATTATCTTGGTGGGGTCACTCCAAATCAGGTGGTTCCTGATAAGGGCAACCTACAGGTGATAGCCAATTCAACCTTCATCACTTTACAGAACTCTCGTCTGTTCATGGTGTTTCAGTTACAAACCGCTGATCCTTTGTCCTCGCTGATATTTGCCACTGGATCCACCGGTTTATTTCCTGCACCACCAAGCTTTGCACTAACCAAACACCTAGACAAGGTTTCCACAAGAATAGACTACTCAAAAGCCAACATTGGAAGTTCACAAGGGGATGGAAATTCTTCACAAGTAGATGGAAGTACTTCACAAGCACCAGACTCCTGTGTCTCCAATCTAAACCTCAGTGTTCCTCTCCTCTTCGACACAACCAATCTCAATTGTCTTCCTGTTTGGAATGCTCAGGGGTATATCCTTAGATATTCTCAGACTTCTCCAAACATATGGAGCTTCATTCTCTCAGCACCGAACACAAATTCTTATATAGCAATGGGGTTCTCTCCCAATGGAGGCATGGTTGGTTCAAGTGCCATTGTGGGGTGGATCTCATCCAATGGGGCAGGTGGAGGCATGAAACAGTATTATCTAACAGGACTCGCACCAAACCAAGTGGTGCCAGATAGAGGCAACTTAAAAGTTCTAACCAACTCAACCTTCATTACATCACAGTCCTCACGTTTGTACATGGCATTCCAGTTACAGACCAACCAACCTCTGTCCCGGTTGATTTATGCCTTTGGACCTAACGGTGTGTTCCCTTCAGCACCAAGTTTTGCATTAACACAGCACCAAGACAAAGTCTCCATTACGTTGAATTACGCAACAGGTTCAAGTGCATTAGGAAAGTCATATATGAACCTGAAAAGAAGCCATGGAGTGCTGAATATCTTGGGATGGGGCATCCTAATCATAATGGGAGCAATAGTTGCTCGTTACTTCAGGGAATGGGATCCATTTTGGTTTTATTTTCACGCTTCAGTTCAATTCTTGGGTTTTGTTCTTGGAGTAATTGGTGTAATTAGTGGTTTTGTGTTGAATAATCAACTCCATGTTGACGTTACTCTTCACAAGGCTCTTGGAATCATCATTTTCGTTCTAGCCTGCTTCCAGGTAATGGCTTTGCTTGGTCGACCAAAGAAGGAATCAAAAGTGAGAAAGTATTGGAATTTATACCATCATAACATGGGGAGAATTTTGATTATACTAGCCGTGGCTAACATTTTCTATGGAATCCAATTAGGGAAGGAGGGAAGTGGATGGAATATAGGTTATGGTATTGTGCTGGCCATATTACTTACAATGGCACTTACTTTTGAGACACAACTCTGCAGTAAAGACTAA 2523 0.4364 MPPLTSWLLLAILALTALAMPPARAAPVASFDDQREFDYFVLALQWPGTYCQRTSSCCPTNGCCRGSNSPKIFTIHLMEYLLLVFLQFGYLLRLCSELISPSEMDSGLTTMMEPGHPVVLEPVTIRKRDFLKNESELALRVVLESLWPFLVISTLTNALEQYWPSLSCGKPSLCHGGKGTFWAHEVVVGIKTHGTCSYPVFRNEYDYFLGVLNVYFKYNVTSVLNEAGYVASNTERYPLGGIISAIENAFHASPLIICSKDSIEELRLCFYKDFQPRDCAVSSDVKIDMVTSKGCPKYVGLPESVSVADSCTSNLSLNVSIPFDTTNLLCLSVWDAQSFILRYAQTYANIWSFILSTPDTNSYIAMGFSVSGGMVGSSAMVGWVASRGASGGIKQYYLGGVTPNQVVPDKGNLQVIANSTFITLQNSRLFMVFQLQTADPLSSLIFATGSTGLFPAPPSFALTKHLDKVSTRIDYSKANIGSSQGDGNSSQVDGSTSQAPDSCVSNLNLSVPLLFDTTNLNCLPVWNAQGYILRYSQTSPNIWSFILSAPNTNSYIAMGFSPNGGMVGSSAIVGWISSNGAGGGMKQYYLTGLAPNQVVPDRGNLKVLTNSTFITSQSSRLYMAFQLQTNQPLSRLIYAFGPNGVFPSAPSFALTQHQDKVSITLNYATGSSALGKSYMNLKRSHGVLNILGWGILIIMGAIVARYFREWDPFWFYFHASVQFLGFVLGVIGVISGFVLNNQLHVDVTLHKALGIIIFVLACFQVMALLGRPKKESKVRKYWNLYHHNMGRILIILAVANIFYGIQLGKEGSGWNIGYGIVLAILLTMALTFETQLCSKD 840
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian9g00572 840 ProSiteProfiles DOMON domain profile. 529 641 IPR005018 -
Vian9g00572 840 Pfam Eukaryotic cytochrome b561 685 805 IPR006593 -
Vian9g00572 840 Pfam Ribonuclease T2 family 152 279 IPR001568 GO:0003723|GO:0033897
Vian9g00572 840 ProSiteProfiles DOMON domain profile. 337 449 IPR005018 -
Vian9g00572 840 PANTHER CYTOCHROME B561 AND DOMON DOMAIN-CONTAINING PROTEIN 308 479 - -
Vian9g00572 840 SMART DOMON_3 555 641 IPR005018 -
Vian9g00572 840 SMART DOMON_3 363 449 IPR005018 -
Vian9g00572 840 CDD DOMON_DOH 529 662 IPR045266 -
Vian9g00572 840 SUPERFAMILY Ribonuclease Rh-like 36 76 IPR036430 GO:0003723|GO:0033897
Vian9g00572 840 CDD DOMON_DOH 330 465 IPR045266 -
Vian9g00572 840 ProSiteProfiles Cytochrome b561 domain profile. 648 840 IPR006593 -
Vian9g00572 840 Gene3D - 33 78 IPR036430 GO:0003723|GO:0033897
Vian9g00572 840 CDD Cyt_b561_FRRS1_like 662 833 - -
Vian9g00572 840 SMART 561_7 684 805 IPR006593 -
Vian9g00572 840 Gene3D - 133 308 IPR036430 GO:0003723|GO:0033897
Vian9g00572 840 SUPERFAMILY Ribonuclease Rh-like 149 280 IPR036430 GO:0003723|GO:0033897
Vian9g00572 840 Gene3D - 660 837 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian9g00572 Vian-Chr9 6647758 6663163 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian9g00572 - - gmx:100803524 972.615